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LOCUS	    JF906592		    1201 bp    RNA     linear	VRL 14-SEP-2011
DEFINITION  HIV-1 isolate BJ07238 from China pol protein (pol) and gag protein
	    (gag) genes, partial cds
ACCESSION   JF906592
VERSION     JF906592.1 GI:336359897
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1201)
            Show all sequences for reference 1
  AUTHORS   Ye,J.R., Lu,H.Y., Wang,W.S., Guo,L., Xin,R.L., Yu,S.Q., Wu,T.C.,
	    Zeng,Y. and He,X.
  TITLE     The Prevalence of Drug Resistance Mutations Among Treatment-Naive
	    HIV-Infected Individuals in Beijing, China.
  JOURNAL   AIDS Res Hum Retroviruses. 2011 Aug 10.
  PUBMED    21830915
REFERENCE   2 (bases 1 to 1201)
            Show all sequences for reference 2
  AUTHORS   Ye,J.-R., Lu,H.-Y., Xin,R.-L., Yu,S.-Q., Wang,W.-S., He,X. and
	    Zeng,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2011) National Institute for Viral Disease
	    Control and Prevention, China Center for Disease Prevention and
	    Control, Yingxin Street Xuan Wu District, Beijng 100052, China
COMMENT     Annotation information was provided by the author. Some of the
	    information does not have GenBank feature identifiers and is being
	    provided in the comment section. Information in this section is
	    searchable in HIV Database at Los Alamos (www.hiv.lanl.gov).;
	    ##HIVDataBaseData-START## Sequence Name BJ07238 Sample city Beijing
	    Culture method primary Sample tissue plasma Patient sex M Patient
	    age 34 Risk factor PB CD4 count 26 ##HIVDataBaseData-END##
FEATURES             Location/Qualifiers
     source	     1..1201
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="BJ07238"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="01-Sep-2007"
		     /note="subtype: B"
     gene	     <1..>1201
		     /gene="pol"
     CDS	     <1..>1201
		     /gene="pol"
		     /codon_start="3"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AEI53705.1"
		     /db_xref="GI:336359899"
		     /translation="DLPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRW
		     KPKMIGGIGGFIKVRQYDQIPIEICGHKAVGTVLIGPTPVNIIGRNLLTQLGCTLNFP
		     ISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTP
		     VFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
		     VPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQN
		     PDIVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYE
		     LHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKELCKLLRGTKALTE
		     VIPLTEEA"
     gene	     <1..48
		     /gene="gag"
     CDS	     <1..48
		     /gene="gag"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AEI53704.1"
		     /db_xref="GI:336359898"
		     /translation="LTSLKSLFGNDPSSQ"
BASE COUNT	461 a	 201 c	  256 g    280 t      3 other
ORIGIN
       1 ttgacctccc tcaaatcact ctttggcaac gacccctcgt cacaataaag ataggggggc 
      61 aattaaagga agctctatta gatacaggag cagatgatac agtattagaa gaaatgaatt 
     121 tgccaggaag atggaaacca aaaatgatag ggggaattgg aggttttatc aaagtaagac 
     181 agtatgatca gatacccata gaaatytgtg gacacaaggc tgtaggtaca gtattaatag 
     241 gacccacacc tgtcaacata attgggagaa atctgttgac tcagcttggt tgcactttaa 
     301 attttcctat tagtcctatt gaaactgtac cagtaaaatt aaagccagga atggatggcc 
     361 caaaagttaa acaatggcca ttgacagaag aaaaaataaa agcattagta gaaatttgta 
     421 cagaaatgga aaaggaaggg aaaatttcaa aaatcgggcc tgaaaatcca tacaatactc 
     481 cagtatttgc cataaagaaa aaagacagta ctaaatggag aaaattagtr gatttcaggg 
     541 aacttaataa aagaactcaa gacttctggg aagttcaatt aggaatacca catccagcag 
     601 ggttaaaaaa gaaaaaatct gtaacagtcc tggatgtggg tgatgcatac ttctcagtcc 
     661 ctttagataa agacttcagg aagtatactg catttaccat acctagtata aataatgaga 
     721 caccagggat cagatatcag tacaatgtgc tgccacaggg atggaaagga tcaccagcaa 
     781 tattccaatc tagcatgaca aaaatcttag agccttttag aaaacaaaat ccagacatag 
     841 ttatctatca atacatggat gatttgtatg taggatctga cttagaaata gggcagcata 
     901 gagcaaaaat agaggaactg agacaacatc tgttgaggtg ggggtttacc acaccagaca 
     961 aaaaacatca gaaagaacct ccattccttt ggatgggtta tgaactccat cctgataaat 
    1021 ggacagtgca gcctatagtg ctgccagaaa aggacagctg gactgtcaat gacatacaga 
    1081 agttagtggg aaagttaaat tgggcaagtc agatttatgc aggaattaag gtaaaggaat 
    1141 tatgtaaact ccttagggga accaaagcay taacagaagt aataccacta acagaagaag 
    1201 c
//
last modified: Tue May 31 10:56 2022


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