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LOCUS	    JF906577		    1201 bp    RNA     linear	VRL 14-SEP-2011
DEFINITION  HIV-1 isolate BJ07149 from China pol protein (pol) and gag protein
	    (gag) genes, partial cds
ACCESSION   JF906577
VERSION     JF906577.1 GI:336359852
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1201)
            Show all sequences for reference 1
  AUTHORS   Ye,J.R., Lu,H.Y., Wang,W.S., Guo,L., Xin,R.L., Yu,S.Q., Wu,T.C.,
	    Zeng,Y. and He,X.
  TITLE     The Prevalence of Drug Resistance Mutations Among Treatment-Naive
	    HIV-Infected Individuals in Beijing, China.
  JOURNAL   AIDS Res Hum Retroviruses. 2011 Aug 10.
  PUBMED    21830915
REFERENCE   2 (bases 1 to 1201)
            Show all sequences for reference 2
  AUTHORS   Ye,J.-R., Lu,H.-Y., Xin,R.-L., Yu,S.-Q., Wang,W.-S., He,X. and
	    Zeng,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2011) National Institute for Viral Disease
	    Control and Prevention, China Center for Disease Prevention and
	    Control, Yingxin Street Xuan Wu District, Beijng 100052, China
COMMENT     Annotation information was provided by the author. Some of the
	    information does not have GenBank feature identifiers and is being
	    provided in the comment section. Information in this section is
	    searchable in HIV Database at Los Alamos (www.hiv.lanl.gov).;
	    ##HIVDataBaseData-START## Sequence Name BJ07149 Sample city Beijing
	    Culture method primary Sample tissue plasma Patient sex M Patient
	    age 31 Risk factor NR CD4 count 291 ##HIVDataBaseData-END##
FEATURES             Location/Qualifiers
     source	     1..1201
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="BJ07149"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="01-Sep-2007"
		     /note="subtype: CRF01_AE"
     gene	     <1..>1201
		     /gene="pol"
     CDS	     <1..>1201
		     /gene="pol"
		     /codon_start="3"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AEI53675.1"
		     /db_xref="GI:336359854"
		     /translation="SFPQITLWQRPLVAVKIGGQLKEALLDTGADDTVLEEINLPGKW
		     KPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFP
		     ISPIDTVPVKLKPGMDGPKVKQWPLTEEKIKALIEICKEMEEEGKISKIGPENPYNTP
		     VFAIKKKDGTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
		     VPLDESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKN
		     PEIVIYQYMDDLYVGSDLEIGQHRIKIEELRAHLLSWGFTTPDKKHQKEPPFLWMGYE
		     LHPDRWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKIKQLCKLLRGAKALTD
		     IVPLTEEA"
     gene	     <1..48
		     /gene="gag"
     CDS	     <1..48
		     /gene="gag"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AEI53674.1"
		     /db_xref="GI:336359853"
		     /translation="SVSLKSLFGNDPLSQ"
BASE COUNT	458 a	 196 c	  266 g    280 t      1 other
ORIGIN
       1 tcagtttccc tcaaatcact ctttggcaac gaccccttgt cgcagtaaaa atagggggac 
      61 agctgaaaga ggctctatta gatacaggag cagatgatac agtattagaa gaaataaatt 
     121 tgccaggaaa atggaaacca aaaatgatag ggggaattgg aggctttatm aaggtaagac 
     181 aatatgatca gatacttata gaaatttgtg gaaaaaaggc tataggtaca gtgttagtag 
     241 gacctacacc tgtcaacata attgggcgga atatgttgac tcagattggc tgtactttaa 
     301 attttccaat tagtcctatt gacactgtac cagtaaaact aaagccagga atggatggac 
     361 caaaagttaa acagtggcca ttgacagagg aaaaaataaa agcattaata gaaatttgta 
     421 aagagatgga agaggaagga aaaatctcaa aaattgggcc tgaaaatcca tacaatactc 
     481 cagtatttgc tataaagaaa aaggatggta ccaaatggag gaaattagtg gatttcagag 
     541 agctcaataa aagaactcag gatttttggg aagttcaatt aggaataccg catccagcag 
     601 gtttaaaaaa gaaaaaatca gtaacagtac tagacgtggg agatgcatat ttttcagttc 
     661 ctttagatga aagttttaga aagtatactg cattcaccat acctagtaca aacaatgaga 
     721 caccaggaat cagatatcag tataatgtgc tgccacaggg atggaaagga tcaccggcaa 
     781 tattccagag cagcatgaca aaaatcttag agccctttag gacaaaaaat ccagaaatag 
     841 tcatctatca atacatggat gacttgtatg taggatctga tttagagata gggcagcaca 
     901 gaataaaaat agaggagcta agagctcatc tattgagctg gggatttact acaccagaca 
     961 aaaagcatca gaaggaacct ccattccttt ggatgggata tgaactccat cctgacagat 
    1021 ggacagtcca gcctatagaa ctgccagaaa aagacagctg gactgtcaat gatatacaga 
    1081 aattagtggg gaaactaaat tgggcgagtc aaatttatgc agggattaag ataaagcaac 
    1141 tgtgtaaact cctcagggga gctaaagcac taacagacat agtaccactg actgaagaag 
    1201 c
//
last modified: Tue May 31 10:56 2022


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