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LOCUS	    JF706450		    2541 bp    RNA     linear	VRL 12-APR-2011
DEFINITION  HIV-1 isolate KM34BlR6 from Cameroon envelope glycoprotein (env)
	    gene, complete cds
ACCESSION   JF706450
VERSION     JF706450.1 GI:328550324
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2541)
            Show all sequences for reference 1
  AUTHORS   Brown,R.J.P., Peters,P.J., Caron,C., Gonzalez-Perez,M.P.,
	    Stones,L., Ankghuambom,C., Pondei,K., McClure,C.P., Alemnji,G.,
	    Taylor,S., Sharp,P.M., Clapham,P.R. and Ball,J.K.
  TITLE     Intercompartmental Recombination of HIV-1 Contributes to env
	    Intrahost Diversity and Modulates Viral Tropism and Sensitivity to
	    Entry Inhibitors.
  JOURNAL   J. Virol.. 85(12); 6024-37 (2011)
  PUBMED    21471230
REFERENCE   2 (bases 1 to 2541)
            Show all sequences for reference 2
  AUTHORS   Brown,R.J.P., Peters,P.J., Caron,C., Paz Gonzalez-Perez,M.,
	    Stones,L., Ankghuambom,C., Pondei,K., McClure,C.P., Alemnji,G.,
	    Taylor,S., Sharp,P.M., Clapham,P.R. and Ball,J.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2011) School of Molecular Medical Sciences, The
	    University of Nottingham, Queen''s Medical Centre, Nottingham NG7
	    7UH, UK
FEATURES             Location/Qualifiers
     source	     1..2541
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="KM34BlR6"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Cameroon"
		     /collection_date="27-Mar-2006"
		     /note="subtype: U"
     gene	     1..2541
		     /gene="env"
     CDS	     1..2541
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AEB22017.1"
		     /db_xref="GI:328550325"
		     /translation="MKARGTQMSWPHLWKWGTLILGLVIICSASDLWVTVYYGVPVWK
		     DAETTLFCASDAKGYDKEVHNVWATHACVPTDPDPQEMFLVNVSESFNMWENNMVDQM
		     HTDIISLWDQSLKPCVQLTPLCVTLNCTNVNTNTSSANDTLREEPDAVKNCSFNITTE
		     LKDKQKKEYALFYRVDVVPINNNSSSSYRLINCNTSTVTQACPKVSFEPIPIHYCAPA
		     GFAILKCNDKRFNGTGLCRNVSTVQCTHGIRPVVTTQLLLNGSLAENGTIIRSKNISD
		     NTKNIIVQFNKTVAINCTRPNNNTRKSVHIGPGQTFYATGDIIGDIRQAHCNVSGEEW
		     KEALQQVVIQLREHFNNETITFTNSSGGDLEIVTHSFNCGGEFFYCYTSRLFDSTWNK
		     TNTTDTIPNGNITLPCRIKQIINIWQRVGQAMYAPPIAGKIQCNSNITGLILIRDGGD
		     SNTSDEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRQVVQRAKRAVGIGAV
		     FLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQL
		     QARLLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKTHDDIWENMTWMQWEKE
		     ISNYTDTIYGLIEKAQNQQEKNEQELLALDKWASLWSWFSITNWLWYIRLFIMIVGGL
		     IGLRIVFAVLNIINRCRQGYSPLSFQTLTHHQRGPDRPGEIEEGGGEQDKDRSVRLVS
		     GFFALAWDDLRSLCLFSYHHLRDFTLIAVRTVTRGLQLGWEALKYLWNLLAYWGQEIK
		     NSAINLLDTTAIAVANWTDRVIEIGQRVGRAILHIPRRIRQGFERALL"
BASE COUNT	889 a	 442 c	  591 g    619 t
ORIGIN
       1 atgaaagcga gggggacaca gatgagttgg ccacacttgt ggaaatgggg gactttgatc 
      61 cttgggttgg tgataatttg tagtgcctca gacttgtggg ttacagttta ttatggggtt 
     121 cctgtgtgga aagatgcaga gaccacccta ttttgtgcat cagatgctaa aggatatgat 
     181 aaagaggtac ataatgtctg ggctacacat gcctgtgtac ctacagatcc cgacccacaa 
     241 gaaatgtttc tagtaaatgt atcagaaagt tttaacatgt gggagaataa catggtagac 
     301 cagatgcata cagacataat cagtttatgg gatcaaagct taaagccatg tgtacagtta 
     361 accccactct gtgttacttt aaattgtact aatgttaata ctaatactag tagtgctaat 
     421 gacaccctgc gggaagaacc agatgcagta aaaaactgtt ctttcaatat aaccacagaa 
     481 ttaaaagata aacagaaaaa agaatatgca ttgttttata gggttgatgt agtgccaatc 
     541 aacaacaaca gcagtagtag ttataggcta ataaattgta atacctcaac cgttacacag 
     601 gcttgtccaa aggtatcctt tgagccaatt cccatacatt attgtgctcc tgctggtttt 
     661 gcgattctaa agtgtaatga taaaaggttc aatgggacag ggctatgcag gaatgtcagc 
     721 acagtacaat gcacacatgg aattagacca gtggtgacaa ctcaactact gttaaatggc 
     781 agtctagcag aaaatggtac aataattaga tctaaaaata tctcagataa tacaaaaaac 
     841 ataatagtac agtttaataa aactgtagca attaattgta caagacccaa caacaataca 
     901 agaaaaagtg tacatatagg accaggacaa acattctatg caacaggtga cataataggg 
     961 gatataagac aagcacattg taatgtcagt ggagaagaat ggaaagaagc tttacaacag 
    1021 gtagttatac aattaaggga acactttaac aatgaaacaa taacctttac taacagttca 
    1081 ggaggggatt tagaaattgt aacacatagt tttaattgtg gaggagaatt cttctattgc 
    1141 tatacatcaa ggctatttga cagcacttgg aacaaaacta acacaactga cacaatacca 
    1201 aatggcaata taactctccc atgcagaata aaacaaatta taaacatatg gcaaagagta 
    1261 gggcaagcaa tgtatgcccc tcccattgcc ggaaaaattc aatgtaactc aaatatcaca 
    1321 ggtctcatat taataagaga tggtggtgat agtaatacaa gtgatgagat cttcagacct 
    1381 ggagggggag acatgagaga caactggaga agtgaactgt ataaatataa ggtagtgaaa 
    1441 attgaaccac taggagtagc acccaccagg gcaaaaagac aagtggtgca gagagcaaaa 
    1501 agagcagtgg gaataggagc tgtgttcctt gggttcttgg gagcagcagg aagcactatg 
    1561 ggcgcggcgt caataacgct gacggtacag gccagacaat tattgtctgg tatagtgcaa 
    1621 cagcaaagca atttgctgaa ggctatagaa gcgcaacagc atctgttgca gctcacagtc 
    1681 tggggcatta aacagctcca ggcgagactc ctggctgtgg aaagatacct aaaggaccaa 
    1741 cagcttctag ggatttgggg ctgctctgga aaactcatct gcaccactaa tgtgccctgg 
    1801 aattctagtt ggagtaataa aactcatgac gacatttggg aaaacatgac ctggatgcaa 
    1861 tgggaaaagg agattagcaa ttacacagac acaatatacg gattaattga aaaagcacaa 
    1921 aaccagcagg aaaagaatga acaggaatta ttggcattgg acaaatgggc aagtctgtgg 
    1981 agttggttta gcataacaaa ttggctatgg tatataagat tatttataat gatagtagga 
    2041 ggtttaatag ggttaagaat agtttttgct gtgcttaata taataaatag atgtaggcag 
    2101 ggatactcac ctttgtcatt ccagaccctt acccaccacc agaggggacc cgacaggccc 
    2161 ggagaaatcg aagaaggagg tggagagcaa gacaaagaca gatccgtgag attagtgagc 
    2221 ggattctttg cgcttgcctg ggacgacctg cggagcctgt gcctcttcag ctaccaccac 
    2281 ttgagagact tcacattaat tgcagtgagg actgtgacca ggggactgca actggggtgg 
    2341 gaagccctca aatatctatg gaatcttcta gcatactggg gtcaggagat aaagaatagt 
    2401 gctattaatt tgcttgatac aacagcaata gcagtagcta actggacaga tagagttata 
    2461 gaaataggac aaagagttgg tagagctatt ctccacatac ccagaagaat aagacaaggc 
    2521 tttgaaaggg ctttgctata a
//
last modified: Tue May 31 10:56 2022


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