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LOCUS	    JF298221		    2188 bp    DNA     linear	VRL 13-AUG-2011
DEFINITION  Simian immunodeficiency virus isolate 251stx08 envelope
	    glycoprotein (env) gene, partial cds
ACCESSION   JF298221
VERSION     JF298221.1 GI:343131320
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus (SIV)
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2188)
            Show all sequences for reference 1
  AUTHORS   Ma,Z.-M., Keele,B.F., Qureshi,H., Stone,M., Desilva,V., Fritts,L.,
	    Lifson,J.D. and Miller,C.J.
  TITLE     SIVmac251 is inefficiently transmitted to rhesus macaques by penile
	    inoculation with a single SIVenv variant found in ramp-up phase
	    plasma.
  JOURNAL   AIDS Res. Hum. Retroviruses. 27(12); 1259-69 (2011)
  PUBMED    21732792
REFERENCE   2 (bases 1 to 2188)
            Show all sequences for reference 2
  AUTHORS   Ma,Z.-M., Keele,B.F., Qureshi,H.J., Stone,M., Desilva,V., Fritts,L.
	    and Miller,C.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-FEB-2011) California National Primate Research
	    Center, University of California, Davis, One Sheilds Ave, Davis, CA
	    95616, USA
FEATURES             Location/Qualifiers
     source	     1..2188
		     /organism="Simian immunodeficiency virus"
		     /proviral="Simian immunodeficiency virus"
		     /mol_type="genomic DNA"
		     /isolate="251stx08"
		     /db_xref="taxon:11723"
     gene	     <1..>2188
		     /gene="env"
     CDS	     <1..>2188
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AEL89204.1"
		     /db_xref="GI:343131321"
		     /translation="ESFDAWENTVTEQAIEDVWQLFETSIKPCVKLSPLCITMRCNKS
		     ETDKWGLTKSSTTTTATTATPASTTRTTSAKIDMVNETSSCITHNNCTGLEQEQMISC
		     KFNMTGLKRDKKKEYNETWYSTDLVCEQGNSTDNESRCYMNHCNTSVIQESCDKHYWD
		     TIRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAEN
		     RTYIYWHGRDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQA
		     WCWFGGNWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFL
		     YCKMNWFLNWVEDRNLTLTTQKLRERHKRNYVPCHIRQIINTWHKVGKNVYLPPREGD
		     LTCNSTVTSLIANIDWTDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDVKR
		     YTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQLLDVV
		     KRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTP
		     DWNNDTWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNSWDVFGNWFDLASWI
		     RYIQYGIYIVVGVILLRIVIYIVQMLAKLRQGYRPVFSSPPSYSQQIHTQQDPALPTR
		     EGKEGDGGEGGGNSSWPWQIEYIHFLIRQLIRLLTWLFSNCRTLLSR"
BASE COUNT	731 a	 401 c	  514 g    542 t
ORIGIN
       1 gaaagctttg atgcttggga gaatacagtc acagaacagg caatagagga tgtatggcaa 
      61 ctctttgaga cctcaataaa gccttgtgta aaattatccc cattatgcat tactatgaga 
     121 tgcaataaaa gtgagacaga taaatgggga ttaacaaaat catcaacaac aacaacagca 
     181 acaacagcaa caccagcatc aacaacaagg acaacatcag caaaaataga catggtcaat 
     241 gagactagtt cttgtataac tcataataat tgcacaggct tggaacaaga gcaaatgata 
     301 agctgtaagt tcaacatgac agggttaaaa agagacaaga aaaaggagta caatgaaact 
     361 tggtactcta cagatttggt ctgtgaacaa gggaatagca ctgataatga aagtagatgc 
     421 tacatgaatc actgtaacac ttctgttatc caagagtctt gtgacaagca ttattgggat 
     481 actattagat ttaggtattg tgcacctcca ggttatgctt tgcttagatg taatgacaca 
     541 aattattcag gctttatgcc taaatgttct aaggtggtgg tctcttcatg cacaaggatg 
     601 atggagacac agacttctac ttggtttggc tttaatggaa ctagagcaga aaatagaact 
     661 tatatttact ggcatggtag agataatagg actataatta gtttaaataa gtattataat 
     721 ctaacaatga aatgtagaag accaggaaat aagacagttt taccagtcac cattatgtct 
     781 ggattggttt tccactcaca accaatcaat gataggccaa agcaggcatg gtgttggttt 
     841 ggaggaaatt ggaaggatgc aataaaagag gtgaagcaga ccattgtcaa acatcccagg 
     901 tatactggaa ctaacaatac tgataagatc aatttgacgg ctcctagagg aggagatccg 
     961 gaagttacct tcatgtggac aaattgcaga ggagagtttc tctactgtaa aatgaattgg 
    1021 tttctaaatt gggtagaaga taggaatcta actctaacta cccagaagct aagggaacgg 
    1081 cataaaagga attacgtgcc atgtcatatt agacaaataa tcaacacttg gcataaagta 
    1141 ggcaaaaatg tttatttgcc tccaagagag ggagacctca cgtgtaactc cacagtgacc 
    1201 agtctcatag caaacataga ttggactgat ggaaatcaaa ctaatatcac catgagtgca 
    1261 gaggtggcag aactgtatcg attggaattg ggagattata aattagtaga gatcactcca 
    1321 attggcttgg cccccacaga tgtgaagagg tatactactg gtggcacctc aagaaataaa 
    1381 agaggggtct ttgtgctagg gttcttgggt tttctcgcaa cggcaggttc tgcaatgggc 
    1441 gcggcgtcgt tgacgctgac cgctcagtcc cggactttat tggctgggat agtgcagcaa 
    1501 cagcaacagc tgttggacgt ggtcaagaga caacaagaat tgttgcgact gaccgtctgg 
    1561 ggaacaaaga acctccagac tagggtcact gccatcgaga agtacttaaa ggaccaggcg 
    1621 cagctgaatg cttggggatg tgcgtttaga caagtctgcc acactactgt accatggcca 
    1681 aatgcaagtc taacaccaga ctggaacaat gatacttggc aagagtggga gcgaaaggtt 
    1741 gacttcttgg aggaaaatat aacggccctt ctagaagagg cacaaattca acaagagaag 
    1801 aacatgtatg aattacaaaa gttgaatagc tgggatgtgt ttggcaattg gtttgacctt 
    1861 gcttcttgga taaggtatat acaatatgga atttatatag ttgtaggagt aatactgtta 
    1921 agaatagtga tctatatagt acaaatgcta gctaagttaa ggcaggggta taggccagtg 
    1981 ttctcttccc caccctctta ttcccagcag atccataccc aacaggaccc ggcactgcca 
    2041 accagagaag gcaaagaagg agacggtgga gaaggcggtg gcaacagctc ctggccttgg 
    2101 cagatagaat atattcattt cctgatccgc caactgatac gcctcttgac ttggctattc 
    2161 agcaactgca gaaccttgct atcgagag
//
last modified: Tue May 31 10:56 2022


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