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LOCUS JF298221 2188 bp DNA linear VRL 13-AUG-2011
DEFINITION Simian immunodeficiency virus isolate 251stx08 envelope
glycoprotein (env) gene, partial cds
ACCESSION JF298221
VERSION JF298221.1 GI:343131320
KEYWORDS .
SOURCE Simian immunodeficiency virus (SIV)
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2188)
Show all sequences for reference 1
AUTHORS Ma,Z.-M., Keele,B.F., Qureshi,H., Stone,M., Desilva,V., Fritts,L.,
Lifson,J.D. and Miller,C.J.
TITLE SIVmac251 is inefficiently transmitted to rhesus macaques by penile
inoculation with a single SIVenv variant found in ramp-up phase
plasma.
JOURNAL AIDS Res. Hum. Retroviruses. 27(12); 1259-69 (2011)
PUBMED 21732792
REFERENCE 2 (bases 1 to 2188)
Show all sequences for reference 2
AUTHORS Ma,Z.-M., Keele,B.F., Qureshi,H.J., Stone,M., Desilva,V., Fritts,L.
and Miller,C.J.
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2011) California National Primate Research
Center, University of California, Davis, One Sheilds Ave, Davis, CA
95616, USA
FEATURES Location/Qualifiers
source 1..2188
/organism="Simian immunodeficiency virus"
/proviral="Simian immunodeficiency virus"
/mol_type="genomic DNA"
/isolate="251stx08"
/db_xref="taxon:11723"
gene <1..>2188
/gene="env"
CDS <1..>2188
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AEL89204.1"
/db_xref="GI:343131321"
/translation="ESFDAWENTVTEQAIEDVWQLFETSIKPCVKLSPLCITMRCNKS
ETDKWGLTKSSTTTTATTATPASTTRTTSAKIDMVNETSSCITHNNCTGLEQEQMISC
KFNMTGLKRDKKKEYNETWYSTDLVCEQGNSTDNESRCYMNHCNTSVIQESCDKHYWD
TIRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAEN
RTYIYWHGRDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQA
WCWFGGNWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFL
YCKMNWFLNWVEDRNLTLTTQKLRERHKRNYVPCHIRQIINTWHKVGKNVYLPPREGD
LTCNSTVTSLIANIDWTDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDVKR
YTTGGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQLLDVV
KRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTP
DWNNDTWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNSWDVFGNWFDLASWI
RYIQYGIYIVVGVILLRIVIYIVQMLAKLRQGYRPVFSSPPSYSQQIHTQQDPALPTR
EGKEGDGGEGGGNSSWPWQIEYIHFLIRQLIRLLTWLFSNCRTLLSR"
BASE COUNT 731 a 401 c 514 g 542 t
ORIGIN
1 gaaagctttg atgcttggga gaatacagtc acagaacagg caatagagga tgtatggcaa
61 ctctttgaga cctcaataaa gccttgtgta aaattatccc cattatgcat tactatgaga
121 tgcaataaaa gtgagacaga taaatgggga ttaacaaaat catcaacaac aacaacagca
181 acaacagcaa caccagcatc aacaacaagg acaacatcag caaaaataga catggtcaat
241 gagactagtt cttgtataac tcataataat tgcacaggct tggaacaaga gcaaatgata
301 agctgtaagt tcaacatgac agggttaaaa agagacaaga aaaaggagta caatgaaact
361 tggtactcta cagatttggt ctgtgaacaa gggaatagca ctgataatga aagtagatgc
421 tacatgaatc actgtaacac ttctgttatc caagagtctt gtgacaagca ttattgggat
481 actattagat ttaggtattg tgcacctcca ggttatgctt tgcttagatg taatgacaca
541 aattattcag gctttatgcc taaatgttct aaggtggtgg tctcttcatg cacaaggatg
601 atggagacac agacttctac ttggtttggc tttaatggaa ctagagcaga aaatagaact
661 tatatttact ggcatggtag agataatagg actataatta gtttaaataa gtattataat
721 ctaacaatga aatgtagaag accaggaaat aagacagttt taccagtcac cattatgtct
781 ggattggttt tccactcaca accaatcaat gataggccaa agcaggcatg gtgttggttt
841 ggaggaaatt ggaaggatgc aataaaagag gtgaagcaga ccattgtcaa acatcccagg
901 tatactggaa ctaacaatac tgataagatc aatttgacgg ctcctagagg aggagatccg
961 gaagttacct tcatgtggac aaattgcaga ggagagtttc tctactgtaa aatgaattgg
1021 tttctaaatt gggtagaaga taggaatcta actctaacta cccagaagct aagggaacgg
1081 cataaaagga attacgtgcc atgtcatatt agacaaataa tcaacacttg gcataaagta
1141 ggcaaaaatg tttatttgcc tccaagagag ggagacctca cgtgtaactc cacagtgacc
1201 agtctcatag caaacataga ttggactgat ggaaatcaaa ctaatatcac catgagtgca
1261 gaggtggcag aactgtatcg attggaattg ggagattata aattagtaga gatcactcca
1321 attggcttgg cccccacaga tgtgaagagg tatactactg gtggcacctc aagaaataaa
1381 agaggggtct ttgtgctagg gttcttgggt tttctcgcaa cggcaggttc tgcaatgggc
1441 gcggcgtcgt tgacgctgac cgctcagtcc cggactttat tggctgggat agtgcagcaa
1501 cagcaacagc tgttggacgt ggtcaagaga caacaagaat tgttgcgact gaccgtctgg
1561 ggaacaaaga acctccagac tagggtcact gccatcgaga agtacttaaa ggaccaggcg
1621 cagctgaatg cttggggatg tgcgtttaga caagtctgcc acactactgt accatggcca
1681 aatgcaagtc taacaccaga ctggaacaat gatacttggc aagagtggga gcgaaaggtt
1741 gacttcttgg aggaaaatat aacggccctt ctagaagagg cacaaattca acaagagaag
1801 aacatgtatg aattacaaaa gttgaatagc tgggatgtgt ttggcaattg gtttgacctt
1861 gcttcttgga taaggtatat acaatatgga atttatatag ttgtaggagt aatactgtta
1921 agaatagtga tctatatagt acaaatgcta gctaagttaa ggcaggggta taggccagtg
1981 ttctcttccc caccctctta ttcccagcag atccataccc aacaggaccc ggcactgcca
2041 accagagaag gcaaagaagg agacggtgga gaaggcggtg gcaacagctc ctggccttgg
2101 cagatagaat atattcattt cctgatccgc caactgatac gcctcttgac ttggctattc
2161 agcaactgca gaaccttgct atcgagag
//
last modified: Tue May 31 10:56 2022