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LOCUS HQ538982 615 bp DNA linear VRL 09-FEB-2011
DEFINITION HIV-1 isolate HM132 from Singapore envelope glycoprotein (env)
gene, partial cds
ACCESSION HQ538982
VERSION HQ538982.1 GI:321530645
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 615)
Show all sequences for reference 1
AUTHORS Ng,O.T., Munshaw,S., Lamers,S.L., Chew,K.K., Lin,L., Redd,A.D.,
Manucci,J., Quinn,T.C., Ray,S.C., Chua,A., Leo,Y.S. and
Laeyendecker,O.
TITLE Molecular epidemiology of HIV type 1 in Singapore and
identification of novel CRF01_AE/B recombinant forms.
JOURNAL AIDS Res. Hum. Retroviruses. 27(10); 1135-7 (2011)
PUBMED 21235306
REFERENCE 2 (bases 1 to 615)
Show all sequences for reference 2
AUTHORS Ng,O., Munshaw,S., Laeyendecker,O., Lamers,S., Chew,K., Lin,L.,
Redd,A., Gamaliel,J., Quinn,T., Ray,S., Chua,A. and Leo,Y.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2010) School of Medicine, Johns Hopkins,
Baltimore, MD 21205, USA
FEATURES Location/Qualifiers
source 1..615
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="HM132"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Singapore"
/collection_date="2008"
/note="subtype: 01_AE"
gene <1..>615
/gene="env"
CDS <1..>615
/gene="env"
/note="gp120"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADW94060.1"
/db_xref="GI:321530646"
/translation="KNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKN
IIVHLNESVQINCTRPSNNTRTSLTIGPGQVFYRTGDIIGDIRRAYCEINGTKWNETL
RQVTKKLRESFNKTIIFQPPVGGDPEITMLHFNCRGEFFYCNTTKLFNSTWRGNETKT
TGGSNNTHTVIPCRIKQIINMWQGAGQAMYAPPIRGNINCVSNIT"
BASE COUNT 249 a 105 c 117 g 144 t
ORIGIN
1 aaaaatgtca gctcagtaca atgcacacat ggaattaagc cggtggtatc aactcaattg
61 ctgttaaatg gcagtctagc agaagaagag ataataatca gatctgaaaa cctcacaaat
121 aatgccaaaa acataatagt gcacctcaat gaatctgtac aaatcaattg taccagaccc
181 tccaacaata caagaacaag tttaactata ggaccaggac aagtgttcta tagaacagga
241 gacataatag gagatataag aagggcatat tgtgagatta atggaacaaa atggaatgaa
301 actttaagac aggtaactaa aaaattaaga gaaagcttta ataagacaat aatctttcaa
361 ccacccgtag gaggagatcc agaaattaca atgcttcatt ttaattgtag aggggaattt
421 ttctattgca atacaacaaa actgtttaat agtacttgga gaggaaatga aaccaaaacc
481 acgggggggt ctaataacac tcacactgtc attccatgca ggataaagca aattataaac
541 atgtggcagg gagcaggaca agcaatgtat gctcctccca tcaggggaaa cattaattgt
601 gtatcaaata ttaca
//
last modified: Tue May 31 10:56 2022