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LOCUS HQ538918 582 bp DNA linear VRL 09-FEB-2011
DEFINITION HIV-1 isolate HM027 from Singapore envelope glycoprotein (env)
gene, partial cds
ACCESSION HQ538918
VERSION HQ538918.1 GI:321530526
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 582)
Show all sequences for reference 1
AUTHORS Ng,O.T., Munshaw,S., Lamers,S.L., Chew,K.K., Lin,L., Redd,A.D.,
Manucci,J., Quinn,T.C., Ray,S.C., Chua,A., Leo,Y.S. and
Laeyendecker,O.
TITLE Molecular epidemiology of HIV type 1 in Singapore and
identification of novel CRF01_AE/B recombinant forms.
JOURNAL AIDS Res. Hum. Retroviruses. 27(10); 1135-7 (2011)
PUBMED 21235306
REFERENCE 2 (bases 1 to 582)
Show all sequences for reference 2
AUTHORS Ng,O., Munshaw,S., Laeyendecker,O., Lamers,S., Chew,K., Lin,L.,
Redd,A., Gamaliel,J., Quinn,T., Ray,S., Chua,A. and Leo,Y.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2010) School of Medicine, Johns Hopkins,
Baltimore, MD 21205, USA
FEATURES Location/Qualifiers
source 1..582
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="HM027"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Singapore"
/collection_date="2008"
/note="subtype: B"
gene <1..>582
/gene="env"
CDS <1..>582
/gene="env"
/note="gp120"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADW94005.1"
/db_xref="GI:321530527"
/translation="TNVSTVQCTHGIRPVVSTQLLLNGSLAEEDIIIKSENFTNNAKT
IIVQLNETVKIECIRPSNNTRKSIQLAGGRSLYATGEIIGDIRQAHCNVSAEKWNQTL
RQVAIKLRDQLEDKNKTITFKPPSGGDPEIVMLTLNCGGEFFYCNTTKLFNNTLLNNN
TWNSTWQKSEKGNNERNIILPCRIKQIINRWQEV"
BASE COUNT 244 a 89 c 117 g 132 t
ORIGIN
1 acaaatgtca gtacagtaca atgtacacat ggaattaggc cagtagtgtc aactcaactg
61 ctgttaaatg gcagtctagc agaggaagac ataataatta aatctgaaaa tttcacgaac
121 aatgcaaaaa ccataatagt acagctgaat gagactgtaa aaattgagtg tataagaccc
181 agcaacaata caagaaagag tatacaatta gcagggggga gatcactcta tgcaacagga
241 gaaataatag gagatataag acaagcacat tgtaatgtta gtgcagaaaa gtggaatcaa
301 actttaagac aggtagctat aaaattgaga gaccaattag aagataagaa taagacaata
361 acctttaagc caccctcagg aggggatcca gaaattgtaa tgctcacact taattgtgga
421 ggggaatttt tctactgtaa tacaacaaaa ctgtttaata acactttgct gaataataat
481 acttggaata gtacttggca aaagtcagag aaagggaata acgaacgtaa catcatactc
541 ccatgcagaa taaaacaaat tataaacagg tggcaggaag ta
//
last modified: Tue May 31 10:56 2022