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LOCUS HQ537882 877 bp DNA linear VRL 16-NOV-2010
DEFINITION HIV-1 clone EN_COT07b from USA nonfunctional envelope glycoprotein
(env) gene, partial sequence
ACCESSION HQ537882
VERSION HQ537882.1 GI:312163038
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 877)
Show all sequences for reference 1
AUTHORS Scaduto,D.I., Brown,J.M., Haaland,W.C., Zwickl,D.J., Hillis,D.M.
and Metzker,M.L.
TITLE Inaugural Article: Source identification in two criminal cases
using phylogenetic analysis of HIV-1 DNA sequences.
JOURNAL Proc Natl Acad Sci U S A. 2010 Nov 15.
PUBMED 21078965
REFERENCE 2 (bases 1 to 877)
Show all sequences for reference 2
AUTHORS Haaland,W.C. and Metzker,M.L.
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2010) Human Genome Sequencing Center, Baylor
College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
FEATURES Location/Qualifiers
source 1..877
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="EN_COT07b"
/country="USA"
/collection_date="2004"
gene <1..>877
/gene="env"
misc_feature <1..>877
/gene="env"
/note="nonfunctional envelope glycoprotein due to
mutation; gp120"
BASE COUNT 354 a 127 c 188 g 208 t
ORIGIN
1 gattctaaag tgtaatgata agaagttcaa tggatcagga ccatgtaaaa atgttagtac
61 agtacaatgt acacatggaa ttagaccagt agtatcaact caactgctgt taaatggcag
121 tccagcagaa gaagagatag taattagatc tgaaaatttc acagataatg ctaaaaccat
181 aatagtacag ctgaatgagt ctgtagcaat tacttgttta agacccaaca acaatacaag
241 aaaaagtata catataggac cagggaaagc attttatgca acaggacaaa taataggaga
301 tataagacaa gcacactgta acattagtag aagcagttgg aataacacct taaaacaaat
361 agttaaaaaa ttaggagaac aatttgggaa taaaacaata atctttaatc aatcctcagg
421 aggggaccca gaaattgtaa ggtacagttt taattgtgga ggggaatttt tctactgtga
481 ttcaacaaaa ctgtttaata gtacttggag atttaatgat acttgggagt ctaatagtac
541 tggggataat actacaggga caaatgacac tatcacactc ccatgcagaa taagacaaat
601 tgtaaacatg tggcagcagg taggaaaagc aatgtatgcc cctcccatca gtggacaaat
661 tagatgttca tcaaatatta caggattgct attaacaaga gatggtggtg gtggtaatga
721 caccaatgac accaggaacg agaccttcag acctggagga ggagatatga gggacaattg
781 gagaagtgaa ttatataaat ataaagtagt aaaaattaaa ccattaggaa tagcacccac
841 caaggcaaag agaagagtgg tgtaaagaga aaggaga
//
last modified: Tue May 31 10:56 2022