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LOCUS HQ537856 859 bp DNA linear VRL 16-NOV-2010
DEFINITION HIV-1 clone WA03PE.en14 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION HQ537856
VERSION HQ537856.1 GI:312162993
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 859)
Show all sequences for reference 1
AUTHORS Scaduto,D.I., Brown,J.M., Haaland,W.C., Zwickl,D.J., Hillis,D.M.
and Metzker,M.L.
TITLE Inaugural Article: Source identification in two criminal cases
using phylogenetic analysis of HIV-1 DNA sequences.
JOURNAL Proc Natl Acad Sci U S A. 2010 Nov 15.
PUBMED 21078965
REFERENCE 2 (bases 1 to 859)
Show all sequences for reference 2
AUTHORS Haaland,W.C. and Metzker,M.L.
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2010) Human Genome Sequencing Center, Baylor
College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
FEATURES Location/Qualifiers
source 1..859
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="WA03PE.en14"
/country="USA"
/collection_date="2004"
gene <1..>859
/gene="env"
CDS <1..>859
/gene="env"
/note="gp120"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADQ37452.1"
/db_xref="GI:312162994"
/translation="ILQCNDKKFNGTGPCRNVSTVQCTHGIRPVVSTQLLLNGSLAEE
ETVVRAEKISDNAKVIIVHLNESVKINCTRPYKTTRRGIHIGPGRAFSGTHIIGDIRQ
AHCDVSKKDWKNTLEKIATKLEEHFRNKTIVFNRSTGGDPEIVMHTFICGGEFFYCNT
TRLFNSTWKRSNSTWNNPIETNTTTDTITLPCRIKQIINMWQEVGKAMYAPPIEGQSK
CTSNITGLILTRDGGQGENNGTETFRPEGGNMKDNWRSELYKYKVVQVEPLGVAPTEA
KRGVVQREKR"
BASE COUNT 346 a 129 c 190 g 194 t
ORIGIN
1 gattctacag tgtaatgata agaaattcaa tggaacagga ccatgtagaa atgtcagcac
61 agtacagtgt acacatggaa ttaggccagt agtatcaact caactgctat taaatggtag
121 tctagcagaa gaagagacag tagttagagc tgaaaagatc tcggacaatg ctaaagtcat
181 aatagtgcat ctcaatgaat ctgtaaaaat taattgtaca agaccctata aaactacaag
241 aagagggata catatagggc caggaagagc attttctgga acacacataa taggagatat
301 aaggcaagca cattgtgatg ttagtaaaaa agattggaag aacaccctag aaaagatagc
361 tacaaaatta gaagaacact ttagaaataa aacaatagtc tttaatcgat ctacaggagg
421 ggatccagaa attgtgatgc acacttttat ttgtggaggg gaatttttct actgcaatac
481 aacaagactg tttaatagta cctggaaaag gtctaatagt acatggaaca atcctataga
541 gacaaatacc actactgaca ctattacact cccatgtaga ataaaacaaa ttataaatat
601 gtggcaggaa gtaggaaaag caatgtatgc ccctcccatt gaaggacaaa gtaagtgtac
661 atcaaatatt acagggctga tactgacaag agatggtggt cagggagaga acaatggcac
721 tgagaccttc agacctgagg gaggaaatat gaaggataat tggagaagtg aattatataa
781 atataaagta gtacaagttg aaccattagg agtagcaccc accgaggcaa agagaggagt
841 ggtgcaaaga gaaaaaaga
//
last modified: Tue May 31 10:56 2022