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LOCUS	    HQ537842		     877 bp    DNA     linear	VRL 16-NOV-2010
DEFINITION  HIV-1 clone EN_COT07a from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   HQ537842
VERSION     HQ537842.1 GI:312162965
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 877)
            Show all sequences for reference 1
  AUTHORS   Scaduto,D.I., Brown,J.M., Haaland,W.C., Zwickl,D.J., Hillis,D.M.
	    and Metzker,M.L.
  TITLE     Inaugural Article: Source identification in two criminal cases
	    using phylogenetic analysis of HIV-1 DNA sequences.
  JOURNAL   Proc Natl Acad Sci U S A. 2010 Nov 15.
  PUBMED    21078965
REFERENCE   2 (bases 1 to 877)
            Show all sequences for reference 2
  AUTHORS   Haaland,W.C. and Metzker,M.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-NOV-2010) Human Genome Sequencing Center, Baylor
	    College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
FEATURES             Location/Qualifiers
     source	     1..877
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="EN_COT07a"
		     /country="USA"
		     /collection_date="2004"
     gene	     <1..>877
		     /gene="env"
     CDS	     <1..>877
		     /gene="env"
		     /note="gp120"
		     /codon_start="2"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADQ37438.1"
		     /db_xref="GI:312162966"
		     /translation="ILKCNDKKFNGSGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEE
		     ETVIRSENFTDNAKTIIVQLNESVAITCLRPNNNTRKSIHIGPGKAFYATGQIIGDIR
		     QAHCNISRSSWNNTLKQIVKKLGEQSGNKTIIFNQSSGGDPEIVRYSFNCGGEFFYCD
		     STKLFNSTWRFNDTWESNSTGDNTTGTNDTITLPCRIRQIVNMWQQVGKAMYAPPISG
		     QIRCSSNITGLLLTRDGGGGNDTNDTRNETFRPGGGDMRDNWRSELYKYKVVRIKPLG
		     IAPTKAKRRVVQRERR"
BASE COUNT	353 a	 130 c	  189 g    205 t
ORIGIN
       1 gattctaaag tgtaatgata agaagttcaa tggatcagga ccatgtaaaa atgttagtac 
      61 agtacaatgt acacatggaa ttagaccagt agtatcaact caactgctgt taaatggcag 
     121 tctagcagaa gaagagacag taattagatc tgaaaatttc acagataatg ctaaaaccat 
     181 aatagtacag ctgaatgagt ctgtagcaat tacttgttta agacccaaca acaatacaag 
     241 aaaaagcata catataggac cagggaaagc attttatgca acaggacaaa taataggaga 
     301 tataagacaa gcacactgta acattagtag aagcagttgg aataacacct taaaacaaat 
     361 agttaaaaaa ttaggagaac aatctgggaa taaaacaata atctttaatc aatcctcagg 
     421 aggggaccca gaaattgtaa ggtacagttt taattgtgga ggggaatttt tctactgtga 
     481 ttcaacaaaa ctgtttaata gtacttggag gtttaatgat acttgggagt ctaatagtac 
     541 tggggataat actacaggga caaatgacac tatcacactc ccatgcagaa taagacaaat 
     601 tgtaaacatg tggcagcagg taggaaaagc aatgtatgcc cctcccatca gtggacaaat 
     661 tagatgttca tcaaatatta caggattgct attaacaaga gatggtggtg gtggtaatga 
     721 caccaatgac accaggaacg agaccttcag acctggagga ggagatatga gggacaattg 
     781 gagaagtgaa ttatataaat ataaagtagt aagaattaaa ccattaggaa tagcacccac 
     841 caaggcaaag agaagagtgg tgcaaagaga aagaaga
//
last modified: Tue May 31 10:56 2022


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