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LOCUS HQ377437 2550 bp RNA linear VRL 21-JAN-2011
DEFINITION HIV-1 isolate subject_498_day1_clone 16 from Brazil envelope
glycoprotein (env) gene, complete cds
ACCESSION HQ377437
VERSION HQ377437.1 GI:317407989
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2550)
Show all sequences for reference 1
AUTHORS McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
TITLE Mapping and Characterization of Vicriviroc Resistance Mutations
From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
a Phase II Study (VICTOR-E1).
JOURNAL J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
PUBMED 21209592
REFERENCE 2 (bases 1 to 2550)
Show all sequences for reference 2
AUTHORS McNicholas,P.M. and Strizki,J.
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES Location/Qualifiers
source 1..2550
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="subject_498_day1_clone 16"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Brazil"
/collection_date="Oct-2006"
gene 1..2550
/gene="env"
CDS 1..2550
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADV17528.1"
/db_xref="GI:317407990"
/translation="MRARETRKNYQHLWKWGMMLLGMLMICSAEEDKLWVTVYYGVPV
WKEATTTLFCASEAKAYDTEVHNVWATHACVPTDPSPHEQVLGNVTENFNMWKNNMVD
QMHEDIKSLWDQSLKPCVKLTPLCVTLNCSDYEKNNNVTTTASTNMVGEIKNCSFNVT
TGIGNKVKKEHALFNRLDIVKSDNDNTSHILVNCNTSVLTQACPKVSFEPIPIHYCAP
AGFAILKCSDPMFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIIRSENIT
NNAKTIIVQLNSSVEINCTRPNNNTRKSIHIGPGKAFYATGDIIGDIRQAHCNISSTA
WNNTLKKIVGKLREHFNKTIIFSPPVRGGDPEIVMHSFNCGGEFFYCNTSQLFNSTWN
INGTWNDTEGEQNITLPCRIRQIVNRWQEVGKAMYAPPIPGKITCRSNITGILLTRDG
GGKNDSLNETFRPGGGDMRDNWRSELYKYKVVRIEPLGIAPTKAKRRVVQRERRAVTL
GAMFLGFLGAAGSTMGAAATTLTVQARQLLSGIVQQQNNLLMAIEAQQHMLQLTVWGI
KQLQARVLAVERYLKDQQLLGIWGCPGKLICTTAVPWNISWSNKTHEEIWQNMTWMQW
EREIDNYTDIIYGLLEKSQNQQEKNEQELLELDKWTSLWSWFDITNWLWYIKIFIMIV
GGLVGLRIVFTALSIANRVRQGYSPLSFQTRLPARRGLDRPEGIEEGGGERDRDTSGY
SVNGFLAIIWVDLRSLCLFSYRRLRDLLLIAARIVELLGRRGWEALKYLWNLLQYWSQ
ELKNSAISLLNTTAIVVGEGTDRIIEALQRAGRAILNIPRRIRQGLERALL"
BASE COUNT 893 a 441 c 603 g 613 t
ORIGIN
1 atgagagcga gggagaccag gaagaattat cagcacttgt ggaaatgggg catgatgctc
61 cttgggatgt taatgatctg tagtgctgaa gaagacaaat tgtgggtcac agtctattat
121 ggagtacctg tgtggaaaga agcaaccacc actctatttt gtgcatcaga ggctaaagca
181 tatgatacag aggtacataa tgtttgggcc acacatgcct gtgtacccac agaccctagc
241 ccacatgaac aagtattggg aaatgtgaca gaaaacttta acatgtggaa aaataacatg
301 gtagaccaga tgcatgaaga tataaagagt ttatgggatc aaagtttaaa gccatgtgta
361 aaattaactc cactctgtgt tactttaaat tgctctgatt atgagaagaa caacaatgtt
421 acaactaccg ccagtactaa catggtggga gaaataaaaa actgctcttt caatgtcact
481 acaggcatag gaaacaaggt aaagaaagag catgcacttt ttaatagact tgatatagta
541 aaatcagata atgataatac aagccatata ttggtaaatt gtaacacctc agtccttaca
601 caggcctgtc caaaggtatc ctttgaacca attcccatac attattgtgc cccggctggt
661 tttgcgattc taaagtgctc tgatccaatg tttaatggaa caggaccatg tacaaatgtc
721 agcacagtac aatgtacaca tggaattagg ccagtagtat caactcaatt gctgctaaat
781 ggcagtttag cagaagaaga ggtaataatt agatctgaaa atatcacaaa caatgctaaa
841 accataatag tacagctgaa cagttctgta gaaattaact gtacaagacc caataacaat
901 acaagaaaaa gtatacatat aggaccaggg aaagcatttt atgcaacagg agatataata
961 ggagatataa gacaagcaca ttgtaacatt agtagcacag cttggaacaa cactttaaaa
1021 aagatagttg gaaaattaag agaacacttt aataagacaa taatctttag tcctcctgtc
1081 agaggagggg acccagaaat tgtaatgcac agctttaatt gtggagggga gtttttctac
1141 tgcaatacat cacaactgtt taatagtact tggaatatta atggtacttg gaatgatact
1201 gaaggagagc aaaatatcac actcccatgc agaataagac aaattgtaaa cagatggcaa
1261 gaagtaggaa aagcaatgta tgcccctccc atcccaggaa aaattacatg tagatcaaat
1321 attacaggga tactattaac aagagatggt ggcggcaaaa atgatagcct taatgaaacc
1381 tttagacctg gaggaggaga tatgagggac aattggagaa gtgaattata taaatataaa
1441 gtagtaagaa ttgaaccatt aggaatagca cccaccaagg caaagagaag agtggtgcag
1501 agagaaagaa gagcagtgac attaggagct atgttccttg ggttcttggg agcagcagga
1561 agcactatgg gcgcagcggc aacgacgctg acggtacaag ccagacaatt attgtctggt
1621 atagtgcaac agcagaacaa tctgctgatg gctattgagg cgcaacagca tatgttgcaa
1681 ctcacagtct ggggcatcaa acagctccaa gcaagagtcc tggctgtgga aagataccta
1741 aaggatcaac agctcctggg gatttggggt tgccctggaa aactcatttg caccactgct
1801 gtgccttgga atattagttg gagtaataaa actcatgagg aaatctggca gaacatgacc
1861 tggatgcagt gggagagaga aatagacaat tacacagaca taatatatgg gttacttgag
1921 aaatcgcaaa accaacaaga aaagaatgaa caggaattat tggaattgga taagtggaca
1981 agtttgtgga gttggtttga cataacaaac tggctgtggt atataaaaat attcataatg
2041 atagtagggg gcttagtagg tttaagaata gtttttactg cactttctat agcaaataga
2101 gttaggcagg gatactcacc attgtcgttc cagacccgcc tcccagccag gaggggactc
2161 gacaggcccg aaggaatcga agaaggaggt ggagagagag acagagacac atccggttac
2221 tcagtgaatg gattcttagc aatcatctgg gtcgacctgc ggagcctgtg cctcttcagc
2281 taccgccgct tgagagactt actcttgatt gcagcgagga ttgtggaact tctgggacgc
2341 agggggtggg aagctctcaa atacttgtgg aatctcctgc agtattggag ccaggaacta
2401 aagaatagtg ctattagctt gcttaatacc acagcaatag tagtaggtga ggggacagat
2461 agaattatag aagctttgca aagagctggt agagctattc tcaacatacc tagaagaata
2521 agacaaggct tagaaagggc tttgctataa
//
last modified: Tue May 31 10:56 2022