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LOCUS	    HQ377437		    2550 bp    RNA     linear	VRL 21-JAN-2011
DEFINITION  HIV-1 isolate subject_498_day1_clone 16 from Brazil envelope
	    glycoprotein (env) gene, complete cds
ACCESSION   HQ377437
VERSION     HQ377437.1 GI:317407989
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2550)
            Show all sequences for reference 1
  AUTHORS   McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
	    McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
  TITLE     Mapping and Characterization of Vicriviroc Resistance Mutations
	    From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
	    a Phase II Study (VICTOR-E1).
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
  PUBMED    21209592
REFERENCE   2 (bases 1 to 2550)
            Show all sequences for reference 2
  AUTHORS   McNicholas,P.M. and Strizki,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
	    2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES             Location/Qualifiers
     source	     1..2550
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="subject_498_day1_clone 16"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Brazil"
		     /collection_date="Oct-2006"
     gene	     1..2550
		     /gene="env"
     CDS	     1..2550
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADV17528.1"
		     /db_xref="GI:317407990"
		     /translation="MRARETRKNYQHLWKWGMMLLGMLMICSAEEDKLWVTVYYGVPV
		     WKEATTTLFCASEAKAYDTEVHNVWATHACVPTDPSPHEQVLGNVTENFNMWKNNMVD
		     QMHEDIKSLWDQSLKPCVKLTPLCVTLNCSDYEKNNNVTTTASTNMVGEIKNCSFNVT
		     TGIGNKVKKEHALFNRLDIVKSDNDNTSHILVNCNTSVLTQACPKVSFEPIPIHYCAP
		     AGFAILKCSDPMFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIIRSENIT
		     NNAKTIIVQLNSSVEINCTRPNNNTRKSIHIGPGKAFYATGDIIGDIRQAHCNISSTA
		     WNNTLKKIVGKLREHFNKTIIFSPPVRGGDPEIVMHSFNCGGEFFYCNTSQLFNSTWN
		     INGTWNDTEGEQNITLPCRIRQIVNRWQEVGKAMYAPPIPGKITCRSNITGILLTRDG
		     GGKNDSLNETFRPGGGDMRDNWRSELYKYKVVRIEPLGIAPTKAKRRVVQRERRAVTL
		     GAMFLGFLGAAGSTMGAAATTLTVQARQLLSGIVQQQNNLLMAIEAQQHMLQLTVWGI
		     KQLQARVLAVERYLKDQQLLGIWGCPGKLICTTAVPWNISWSNKTHEEIWQNMTWMQW
		     EREIDNYTDIIYGLLEKSQNQQEKNEQELLELDKWTSLWSWFDITNWLWYIKIFIMIV
		     GGLVGLRIVFTALSIANRVRQGYSPLSFQTRLPARRGLDRPEGIEEGGGERDRDTSGY
		     SVNGFLAIIWVDLRSLCLFSYRRLRDLLLIAARIVELLGRRGWEALKYLWNLLQYWSQ
		     ELKNSAISLLNTTAIVVGEGTDRIIEALQRAGRAILNIPRRIRQGLERALL"
BASE COUNT	893 a	 441 c	  603 g    613 t
ORIGIN
       1 atgagagcga gggagaccag gaagaattat cagcacttgt ggaaatgggg catgatgctc 
      61 cttgggatgt taatgatctg tagtgctgaa gaagacaaat tgtgggtcac agtctattat 
     121 ggagtacctg tgtggaaaga agcaaccacc actctatttt gtgcatcaga ggctaaagca 
     181 tatgatacag aggtacataa tgtttgggcc acacatgcct gtgtacccac agaccctagc 
     241 ccacatgaac aagtattggg aaatgtgaca gaaaacttta acatgtggaa aaataacatg 
     301 gtagaccaga tgcatgaaga tataaagagt ttatgggatc aaagtttaaa gccatgtgta 
     361 aaattaactc cactctgtgt tactttaaat tgctctgatt atgagaagaa caacaatgtt 
     421 acaactaccg ccagtactaa catggtggga gaaataaaaa actgctcttt caatgtcact 
     481 acaggcatag gaaacaaggt aaagaaagag catgcacttt ttaatagact tgatatagta 
     541 aaatcagata atgataatac aagccatata ttggtaaatt gtaacacctc agtccttaca 
     601 caggcctgtc caaaggtatc ctttgaacca attcccatac attattgtgc cccggctggt 
     661 tttgcgattc taaagtgctc tgatccaatg tttaatggaa caggaccatg tacaaatgtc 
     721 agcacagtac aatgtacaca tggaattagg ccagtagtat caactcaatt gctgctaaat 
     781 ggcagtttag cagaagaaga ggtaataatt agatctgaaa atatcacaaa caatgctaaa 
     841 accataatag tacagctgaa cagttctgta gaaattaact gtacaagacc caataacaat 
     901 acaagaaaaa gtatacatat aggaccaggg aaagcatttt atgcaacagg agatataata 
     961 ggagatataa gacaagcaca ttgtaacatt agtagcacag cttggaacaa cactttaaaa 
    1021 aagatagttg gaaaattaag agaacacttt aataagacaa taatctttag tcctcctgtc 
    1081 agaggagggg acccagaaat tgtaatgcac agctttaatt gtggagggga gtttttctac 
    1141 tgcaatacat cacaactgtt taatagtact tggaatatta atggtacttg gaatgatact 
    1201 gaaggagagc aaaatatcac actcccatgc agaataagac aaattgtaaa cagatggcaa 
    1261 gaagtaggaa aagcaatgta tgcccctccc atcccaggaa aaattacatg tagatcaaat 
    1321 attacaggga tactattaac aagagatggt ggcggcaaaa atgatagcct taatgaaacc 
    1381 tttagacctg gaggaggaga tatgagggac aattggagaa gtgaattata taaatataaa 
    1441 gtagtaagaa ttgaaccatt aggaatagca cccaccaagg caaagagaag agtggtgcag 
    1501 agagaaagaa gagcagtgac attaggagct atgttccttg ggttcttggg agcagcagga 
    1561 agcactatgg gcgcagcggc aacgacgctg acggtacaag ccagacaatt attgtctggt 
    1621 atagtgcaac agcagaacaa tctgctgatg gctattgagg cgcaacagca tatgttgcaa 
    1681 ctcacagtct ggggcatcaa acagctccaa gcaagagtcc tggctgtgga aagataccta 
    1741 aaggatcaac agctcctggg gatttggggt tgccctggaa aactcatttg caccactgct 
    1801 gtgccttgga atattagttg gagtaataaa actcatgagg aaatctggca gaacatgacc 
    1861 tggatgcagt gggagagaga aatagacaat tacacagaca taatatatgg gttacttgag 
    1921 aaatcgcaaa accaacaaga aaagaatgaa caggaattat tggaattgga taagtggaca 
    1981 agtttgtgga gttggtttga cataacaaac tggctgtggt atataaaaat attcataatg 
    2041 atagtagggg gcttagtagg tttaagaata gtttttactg cactttctat agcaaataga 
    2101 gttaggcagg gatactcacc attgtcgttc cagacccgcc tcccagccag gaggggactc 
    2161 gacaggcccg aaggaatcga agaaggaggt ggagagagag acagagacac atccggttac 
    2221 tcagtgaatg gattcttagc aatcatctgg gtcgacctgc ggagcctgtg cctcttcagc 
    2281 taccgccgct tgagagactt actcttgatt gcagcgagga ttgtggaact tctgggacgc 
    2341 agggggtggg aagctctcaa atacttgtgg aatctcctgc agtattggag ccaggaacta 
    2401 aagaatagtg ctattagctt gcttaatacc acagcaatag tagtaggtga ggggacagat 
    2461 agaattatag aagctttgca aagagctggt agagctattc tcaacatacc tagaagaata 
    2521 agacaaggct tagaaagggc tttgctataa 
//
last modified: Tue May 31 10:56 2022


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