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LOCUS	    HQ377419		    2565 bp    RNA     linear	VRL 21-JAN-2011
DEFINITION  HIV-1 isolate subject_485_day1_clone 40 from Brazil envelope
	    glycoprotein (env) gene, complete cds
ACCESSION   HQ377419
VERSION     HQ377419.1 GI:317407953
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2565)
            Show all sequences for reference 1
  AUTHORS   McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
	    McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
  TITLE     Mapping and Characterization of Vicriviroc Resistance Mutations
	    From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
	    a Phase II Study (VICTOR-E1).
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
  PUBMED    21209592
REFERENCE   2 (bases 1 to 2565)
            Show all sequences for reference 2
  AUTHORS   McNicholas,P.M. and Strizki,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
	    2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES             Location/Qualifiers
     source	     1..2565
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="subject_485_day1_clone 40"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Brazil"
		     /collection_date="Oct-2006"
     gene	     1..2565
		     /gene="env"
     CDS	     1..2565
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADV17510.1"
		     /db_xref="GI:317407954"
		     /translation="MRVRGMQRNWQHLGTWGLLFLGVLIICKATQQMWVTVYYGVPVW
		     KEATTILFCASDAKAYDTEVHNVWATHACVPTDPNPQEIDLVNVTENFNMWKNNMVEQ
		     MHEDIISLWDQSLKPCVKLTPLCVTLDCKDVNISNSNSTVNITNVNTTSWQRMQAGEI
		     KNCSFNVSTNIRDKVQTEYALFYNLDVVKIEGGHNTSYRLISCNTSVLTQACPKVSFE
		     PIPIHYCAPAGFAILKCKDKEFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEG
		     VVIRSENFTNNAKTIIVQLNDSVVINCTRPNNNTRKSIHIGPGSAFYATGEIIGDMRQ
		     AHCNISGIKWNNTLKQISTKLRKQFNKTIVFNHSSGGDPEVVMHSFICGGEFFYCDTT
		     QLFNSTWNDTTGSIHTNETITLRCRIKQIVNMWQGVGKAMYAPPIRGQINCTSNITGL
		     LLTRDGGTNGTTETFRPQGGNMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKR
		     AIGVIGAMFLGFLGTAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQL
		     TVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICATAVPWNTSWSNKSYNQIWGNM
		     TWMEWEREIDNYTGLIYSLIEESQIQQEKNEQDLLSLDQWASLWNWFDISNWLSYIKI
		     FIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTHLPARRGPDRPEGTEEDGGDRDR
		     DTSRPLVDGFLAIIWVDLRSLCLFSYHRLRDLLLIVTRTVELLGRRGWELLKYCWNIL
		     QYWSQELKNSAISLLNTTAVAVAEGTDRIIEALQIIGRAILNIPRRIRQGLERALL"
BASE COUNT	900 a	 446 c	  593 g    626 t
ORIGIN
       1 atgagagtga gggggatgca gaggaattgg cagcacttgg ggacatgggg cctcttattc 
      61 ttgggggtgt taataatatg taaggctaca caacagatgt gggttacagt ctattatggg 
     121 gtacctgtgt ggaaagaagc aaccactatt ctattttgtg catcagatgc taaagcatat 
     181 gatacagagg tacataatgt ttgggccaca catgcctgtg tacccacaga ccccaaccca 
     241 caagaaatag acttggtaaa tgtgacagaa aattttaata tgtggaaaaa taacatggta 
     301 gaacaaatgc atgaggatat aattagttta tgggatcaaa gcctaaaacc atgtgtaaaa 
     361 ttaaccccac tctgtgttac tttagattgc aaggatgtga atattagtaa cagcaatagt 
     421 actgtcaaca ttactaacgt gaatactact agctggcaaa gaatgcaagc aggagaaata 
     481 aaaaattgct ctttcaatgt tagtacaaac ataagagata aggtacagac agaatatgca 
     541 cttttttata accttgatgt agtaaaaata gaaggggggc ataatactag ctataggttg 
     601 ataagttgta acacctcagt ccttacacag gcctgtccaa aagtatcctt tgagccaatt 
     661 cccatacatt attgtgcccc ggctggtttt gcgattctaa agtgtaaaga taaggagttc 
     721 aatggatcag gaccatgtac aaatgtcagc acagtacaat gtacacatgg aattaggcca 
     781 gtagtgtcaa ctcaactgct actaaatggc agtctagcag aagaaggggt agtaattaga 
     841 tctgaaaatt tcacaaacaa tgctaaaacc ataatagtac agctgaatga ctctgtagta 
     901 attaattgta caagacctaa caacaataca agaaagagca tacatatagg accaggcagt 
     961 gcattttatg caacaggaga aataatagga gatatgagac aagcacattg taacattagt 
    1021 ggaataaaat ggaacaacac attaaaacaa ataagtacaa agctaagaaa acaatttaat 
    1081 aaaacaatag tctttaatca ctcctcagga ggggacccag aagttgtaat gcacagtttt 
    1141 atttgtggag gggaattttt ctactgtgat acaacacaac tgttcaatag tacttggaat 
    1201 gatactacag ggtcaattca cactaatgaa acgatcacac tccgatgcag aataaaacaa 
    1261 attgtaaaca tgtggcaggg agtaggaaaa gcaatgtatg cccctcccat cagaggacaa 
    1321 attaactgta catcaaatat tacagggctg ctattaacaa gagatggtgg tacgaacggg 
    1381 accaccgaga cctttagacc tcaaggagga aatatgaaag acaattggag aagtgaatta 
    1441 tataaatata aagtagtaaa aattgaacca ttaggaatag cacccaccaa ggcaaagcga 
    1501 agagtggtgc aaagagaaaa aagagcaata ggggtaatag gagctatgtt ccttgggttc 
    1561 ttgggaacag caggaagcac tatgggcgca gcgtcactga cgctgacggt acaggccaga 
    1621 caattattgt ctggtatagt gcaacagcag aacaatttgc tgagagctat tgaggcgcaa 
    1681 caacatctgt tgcaactcac agtctggggc atcaagcaac tccaggcaag agtcctggct 
    1741 gtggaaagat acctaaggga tcaacagctc ctgggaattt ggggttgctc tggaaagctc 
    1801 atttgcgcca ctgctgtgcc ttggaatact agttggagta ataaatctta taatcagatt 
    1861 tggggaaata tgacatggat ggaatgggaa agagaaattg ataattacac aggcttaata 
    1921 tacagcttaa ttgaagaatc gcaaatccaa caagaaaaga atgaacaaga cttattgtca 
    1981 ttagatcaat gggcaagttt gtggaattgg tttgacatat caaactggct atcgtatata 
    2041 aaaatattca taatgatagt agggggctta ataggtttaa gaatagtttt tgctgtactt 
    2101 tctataataa atagagttag gcagggatac tcacccttat cgttccagac ccacctccca 
    2161 gccaggaggg gacccgacag gcccgaagga accgaagaag acggtggaga cagagacaga 
    2221 gacacatcca gaccattagt ggatggattc ttagcaatca tctgggtcga cctgcggagc 
    2281 ctgtgcctct tcagctacca ccgcttgaga gacttactct tgattgtaac gaggactgtg 
    2341 gaactgctgg gacgcagggg gtgggaactc ctcaaatatt gctggaacat cctacagtat 
    2401 tggagtcagg aactaaagaa tagtgctatt agcttgctta ataccacagc agtagcagtg 
    2461 gctgagggga cagacagaat tatagaagct ttgcaaataa ttggaagagc tatcctcaat 
    2521 atacctagaa gaataagaca gggtttggaa agggctttgc tataa
//
last modified: Tue May 31 10:56 2022


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