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LOCUS	    HQ172190		     587 bp    DNA     linear	VRL 01-SEP-2010
DEFINITION  HIV-1 isolate B_B_DNA_f from Zimbabwe envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   HQ172190
VERSION     HQ172190.1 GI:304572483
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 587)
            Show all sequences for reference 1
  AUTHORS   Gantt,S., Carlsson,J., Heath,L., Bull,M.E., Shetty,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Genetic analyses of HIV-1 env sequences demonstrate limited
	    compartmentalization in breast milk and suggest viral replication
	    within the breast that increases with mastitis.
  JOURNAL   J. Virol.. 84(20); 10812-9 (2010)
  PUBMED    20660189
REFERENCE   2 (bases 1 to 587)
            Show all sequences for reference 2
  AUTHORS   Gantt,S., Carlsson,J.N., Heath,L., Bull,M.E., Zijenah,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2010) Center for Childhood Infections and
	    Prematurity, Seattle Children''s Research Institute, 1900 9th Ave,
	    Seattle, WA 98101, USA
FEATURES             Location/Qualifiers
     source	     1..587
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="B_B_DNA_f"
		     /isolation_source="whole blood"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Zimbabwe"
		     /collection_date="2005"
		     /note="subtype: C"
     gene	     <1..>587
		     /gene="env"
     CDS	     <1..>587
		     /gene="env"
		     /note="gp120"
		     /codon_start="2"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADM45383.1"
		     /db_xref="GI:304572484"
		     /translation="DIIIRSENLTNNAKIIIVQFNETINITCTRHNNNTRESMRIGPG
		     HTFYATGDIIGDIREAHCNVSKRNWTKALQGVSEKLKEHFNKTIKFNSSSGGDPEITS
		     HSFNCEGEFFYCNTSQLFNFTYNTTTHNTTSEDITLTLPCRIKQIINMWQEVGQAMYA
		     PPIAGNITCVSNITGLLLVRDGGNTNNSDSTEIFR"
BASE COUNT	246 a	 104 c	  102 g    135 t
ORIGIN
       1 agacataata attagatctg aaaatctgac aaacaatgcc aaaataataa tagtacagtt 
      61 taatgaaact ataaacatta cgtgtacaag acacaacaat aatacaagag aaagcatgag 
     121 aataggacca ggacacacat tctatgcaac aggtgatata ataggagaca tcagagaagc 
     181 acattgtaat gttagtaaaa ggaattggac taaagcttta caaggggtaa gtgaaaaatt 
     241 aaaagaacac tttaataaaa caataaaatt taactcatcc tcaggagggg acccagaaat 
     301 tacgtcgcat agctttaatt gtgaaggaga atttttctat tgcaatacat cgcaactgtt 
     361 taattttaca tacaatacaa ctacacacaa tacaacttca gaggacatca cacttacact 
     421 cccatgcaga ataaaacaaa ttataaacat gtggcaggag gtaggacagg caatgtatgc 
     481 ccctcccatt gcgggaaaca taacatgtgt atcaaacatc acaggactac tattagtacg 
     541 tgatgggggc aacactaaca atagcgatag cacagaaata ttcagac
//
last modified: Tue May 31 10:56 2022


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