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LOCUS	    HQ172169		     603 bp    DNA     linear	VRL 01-SEP-2010
DEFINITION  HIV-1 isolate B_left_BM_DNA_f from Zimbabwe envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   HQ172169
VERSION     HQ172169.1 GI:304572443
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 603)
            Show all sequences for reference 1
  AUTHORS   Gantt,S., Carlsson,J., Heath,L., Bull,M.E., Shetty,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Genetic analyses of HIV-1 env sequences demonstrate limited
	    compartmentalization in breast milk and suggest viral replication
	    within the breast that increases with mastitis.
  JOURNAL   J. Virol.. 84(20); 10812-9 (2010)
  PUBMED    20660189
REFERENCE   2 (bases 1 to 603)
            Show all sequences for reference 2
  AUTHORS   Gantt,S., Carlsson,J.N., Heath,L., Bull,M.E., Zijenah,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2010) Center for Childhood Infections and
	    Prematurity, Seattle Children''s Research Institute, 1900 9th Ave,
	    Seattle, WA 98101, USA
FEATURES             Location/Qualifiers
     source	     1..603
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="B_left_BM_DNA_f"
		     /isolation_source="breast milk cells"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Zimbabwe"
		     /collection_date="2005"
		     /note="subtype: C"
     gene	     <1..>603
		     /gene="env"
     CDS	     <1..>603
		     /gene="env"
		     /note="gp120"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADM45364.1"
		     /db_xref="GI:304572444"
		     /translation="SLAEDIIIRSENLTNNAKTIIVQFNETVKITCTRHNNNTRESMR
		     IGPGHTFYATGDIIGDIREAHCNVSKRNWTKALQGVSEKLKEHFNKTIKFNSSSGGDP
		     EITLHSFNCGGEFFYCNTSQLFNFTYNTTTHNTTSEDITLTLPCRIKQIINMWQEVGQ
		     AMYAPPIAGNITCVSNITGLLLVRDGGNTNISNSIEIFRPG"
BASE COUNT	252 a	 106 c	  106 g    139 t
ORIGIN
       1 agcctagcag aagacataat aattagatct gaaaatctga caaacaatgc caaaacaata 
      61 atagtacagt ttaatgaaac tgtaaaaatt acatgtacaa gacacaacaa taatacaaga 
     121 gaaagtatga ggataggacc aggacacaca ttctatgcaa caggtgatat aataggagac 
     181 atcagagaag cacattgcaa tgttagtaaa aggaattgga ctaaagcttt acaaggggta 
     241 agtgaaaaat taaaagaaca ctttaataaa acaataaaat ttaactcatc ctcaggaggg 
     301 gacccagaaa ttacgttgca tagctttaat tgtggaggag aatttttcta ttgcaataca 
     361 tcgcaactgt ttaattttac atacaataca actacacaca atacaacttc agaggacatc 
     421 acacttacac tcccatgcag aataaaacaa attataaaca tgtggcagga ggtaggacag 
     481 gcaatgtatg cccctcccat tgcaggaaac ataacatgtg tatcaaacat cacaggacta 
     541 ctattagtac gtgatggagg caacactaac attagcaata gcatagaaat attcagacct 
     601 gga
//
last modified: Tue May 31 10:56 2022


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