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LOCUS	    HQ172167		     603 bp    DNA     linear	VRL 01-SEP-2010
DEFINITION  HIV-1 isolate B_left_BM_DNA_d from Zimbabwe envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   HQ172167
VERSION     HQ172167.1 GI:304572439
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 603)
            Show all sequences for reference 1
  AUTHORS   Gantt,S., Carlsson,J., Heath,L., Bull,M.E., Shetty,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Genetic analyses of HIV-1 env sequences demonstrate limited
	    compartmentalization in breast milk and suggest viral replication
	    within the breast that increases with mastitis.
  JOURNAL   J. Virol.. 84(20); 10812-9 (2010)
  PUBMED    20660189
REFERENCE   2 (bases 1 to 603)
            Show all sequences for reference 2
  AUTHORS   Gantt,S., Carlsson,J.N., Heath,L., Bull,M.E., Zijenah,A.K.,
	    Mutsvangwa,J., Musingwini,G., Woelk,G., Zijenah,L.S.,
	    Katzenstein,D.A., Mullins,J.I. and Frenkel,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2010) Center for Childhood Infections and
	    Prematurity, Seattle Children''s Research Institute, 1900 9th Ave,
	    Seattle, WA 98101, USA
FEATURES             Location/Qualifiers
     source	     1..603
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="B_left_BM_DNA_d"
		     /isolation_source="breast milk cells"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Zimbabwe"
		     /collection_date="2005"
		     /note="subtype: C"
     gene	     <1..>603
		     /gene="env"
     CDS	     <1..>603
		     /gene="env"
		     /note="gp120"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADM45362.1"
		     /db_xref="GI:304572440"
		     /translation="SLAEEIIIRSENLTNNAKTIIVQFNETVKITCTRHNNNTRESMR
		     IGPGHTFYATGDIIGDIREAHCNVSKRNWTKALQGVSEKLKEHFNKTIKFNSSSGGDP
		     EITSHSFNCGGEFFYCNTSQLFNYTYNATTDNTTSEDITLTLPCRIKQIINMWQEVGQ
		     AMYAPPIAGNITCVSNITGLLLVRDGGNTNISNSIEIFRPG"
BASE COUNT	254 a	 104 c	  107 g    138 t
ORIGIN
       1 agcctagcag aagaaataat aattagatct gaaaatctga caaacaatgc caaaacaata 
      61 atagtacagt ttaatgaaac tgtaaaaatt acgtgtacaa gacacaacaa taatacaaga 
     121 gaaagcatga gaataggacc aggacacaca ttctatgcaa caggtgatat aataggagac 
     181 atcagagaag cacattgtaa tgttagtaaa aggaattgga ctaaagcttt acaaggggta 
     241 agtgaaaaat taaaagaaca ctttaataaa acaataaaat ttaactcatc ctcaggaggg 
     301 gacccagaaa ttacgtcaca tagctttaat tgtggaggag aatttttcta ttgcaataca 
     361 tcgcaactgt ttaattatac atacaatgca actacagaca atacaacttc agaggacatc 
     421 acacttacac ttccatgcag aataaaacaa attataaaca tgtggcagga ggtaggacag 
     481 gcaatgtatg cccctcccat tgcaggaaac ataacatgtg tatcaaacat cacaggacta 
     541 ctattagtac gtgatggagg caacactaac attagcaata gcatagaaat attcagacct 
     601 gga
//
last modified: Tue May 31 10:56 2022


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