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LOCUS HM745990 799 bp DNA linear VRL 13-MAR-2011
DEFINITION HIV-1 isolate DL2164F3 from Guinea-Bissau envelope glycoprotein
(env) gene, partial cds
ACCESSION HM745990
VERSION HM745990.1 GI:325505212
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 799)
Show all sequences for reference 1
AUTHORS Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E.,
Nowroozalizadeh,S., Biague,A.J., da Silva,Z.J., Jansson,M.,
Fenyo,E.M., Norrgren,H. and Medstrand,P.
TITLE Inhibition of HIV-1 disease progression by contemporaneous HIV-2
infection.
JOURNAL N. Engl. J. Med.. 367(3); 224-32 (2012)
PUBMED 22808957
REFERENCE 2 (bases 1 to 799)
Show all sequences for reference 2
AUTHORS Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E., Biague,A.J., da
Silva,Z.J., Fenyo,E.M., Norrgren,H. and Medstrand,P.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2010) Experimental Medical Science, Molecular
Virology, BMC C13, Solvegatan 19, Lund 22184, Sweden
COMMENT Subtype assigned by LANL database based on RIP and phylogenetic
tree.
FEATURES Location/Qualifiers
source 1..799
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="DL2164F3"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Guinea-Bissau"
/collection_date="19-Apr-2002"
gene <1..>799
/gene="env"
CDS <1..>799
/gene="env"
/note="V1-V3"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADZ17460.1"
/db_xref="GI:325505213"
/translation="TEEFNMWKDNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLNCQH
SITNNITDESMKGEIKNCSFNMTTELRDKRQRVYSLFYKSDIVQMNESTYMYMLINCN
TSAITQACPKVSFEPIPIHYCALAGFAILKCKDKNFNGTGPCTNISTVQCTHGIKPVV
STQLLLNGSLAEKEIVIRSENLTNNAKTIIVQFAEPVRINCIRPNNNTRKSARIGPGQ
AFYATGGVTGNIRWAHCNVSKTRWNSTLQKVATQLRKHFKNNTIIFAN"
BASE COUNT 308 a 151 c 151 g 189 t
ORIGIN
1 gacagaagag tttaacatgt ggaaagataa catggtggag cagatgcata cagatataat
61 cagtctatgg gaccaaagct taaagccatg tgtaaagtta acccctctct gcgtcacttt
121 aaactgccaa cacagcatca ccaacaacat cactgacgaa agcatgaaag gagaaataaa
181 aaactgctcg ttcaatatga ccacagaact aagagataag agacagcgtg tatattcact
241 tttttataaa tctgatatag tacaaatgaa tgaaagtacg tatatgtata tgctaataaa
301 ttgtaatacc tcagccatta cacaggcttg tccaaaggta tcctttgagc caattcccat
361 acattattgt gccctagctg gttttgcgat tttaaagtgt aaggataaga acttcaatgg
421 aacagggcca tgcacaaata ttagcacagt acaatgcaca catggaatca agccagtagt
481 atcaactcaa ctgctgttaa atggcagtct agcagaaaaa gagatagtaa ttagatctga
541 aaacctcaca aacaatgcca aaaccataat agtacagttt gctgagcctg taagaattaa
601 ttgcatcaga cccaacaaca atacaagaaa aagtgcacgt ataggaccag gacaggcatt
661 ctatgcaaca ggtggcgtaa cagggaatat aagatgggca cattgtaatg tcagtaaaac
721 aagatggaat agcactttac aaaaggtggc tacacaatta aggaagcact tcaagaataa
781 cacaataatc tttgctaac
//
last modified: Tue May 31 10:56 2022