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LOCUS HM745955 823 bp DNA linear VRL 13-MAR-2011
DEFINITION HIV-1 isolate DL2102E1 from Guinea-Bissau envelope glycoprotein
(env) gene, partial cds
ACCESSION HM745955
VERSION HM745955.1 GI:325505142
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 823)
Show all sequences for reference 1
AUTHORS Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E.,
Nowroozalizadeh,S., Biague,A.J., da Silva,Z.J., Jansson,M.,
Fenyo,E.M., Norrgren,H. and Medstrand,P.
TITLE Inhibition of HIV-1 disease progression by contemporaneous HIV-2
infection.
JOURNAL N. Engl. J. Med.. 367(3); 224-32 (2012)
PUBMED 22808957
REFERENCE 2 (bases 1 to 823)
Show all sequences for reference 2
AUTHORS Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E., Biague,A.J., da
Silva,Z.J., Fenyo,E.M., Norrgren,H. and Medstrand,P.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2010) Experimental Medical Science, Molecular
Virology, BMC C13, Solvegatan 19, Lund 22184, Sweden
COMMENT Subtype assigned by LANL database based on RIP and phylogenetic
tree.
FEATURES Location/Qualifiers
source 1..823
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="DL2102E1"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Guinea-Bissau"
/collection_date="29-Mar-1996"
gene <1..>823
/gene="env"
CDS <1..>823
/gene="env"
/note="V1-V3"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADZ17425.1"
/db_xref="GI:325505143"
/translation="LENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTL
DCHNFNSSDNTSNNYMQEEIKNCSFNMTTELRDKKQKVNALFYRDDVVKISNNSYRLI
NCNTSAITQACPKVTFEPIPVHYCAPAGFAILKCNDKRFNGTGPCKNVSTVQCTHGIK
PVVSTQLLLNGSLAEEEIVIRSENITNNAKTIIIQLKEPVEINCIRPGNNTRKSVRIG
PGQTFYAKGDIIGDIRQAHCNVSRTKWNSTLQQVATQLRKYSNATITFANSSGGD"
BASE COUNT 324 a 141 c 154 g 204 t
ORIGIN
1 atttggaaaa cgtaacagaa aattttaaca tgtggaaaaa taacatggta gaacagatgc
61 atgaagatat aattagtctg tgggatcaaa gcctaaagcc atgtgtaaag ttaacccctc
121 tctgcgttac tttagattgt cataacttca acagtagtga taacacctct aacaattaca
181 tgcaagagga aataaaaaac tgctctttta atatgaccac agaactaaga gataaaaaac
241 agaaagtgaa tgcacttttt tatagagatg atgtagtaaa aattagtaac aatagttata
301 ggttaataaa ttgtaatacc tcagccatta cacaggcttg tccaaaggta acctttgagc
361 caattcccgt acattattgt gccccagctg gttttgcaat tctaaagtgt aatgataaga
421 ggttcaatgg aacagggcca tgcaagaatg tcagcacagt acaatgcaca catggaatca
481 agccagtagt atcaactcaa ctgctgttaa atggcagtct agcagaagaa gagatagtga
541 ttagatctga aaatatcaca aacaatgcca aaaccataat aatacagtta aaagagcctg
601 tagaaattaa ttgtatcaga cctggcaaca atacaagaaa aagtgtacgt ataggaccag
661 gacaaacatt ctatgcaaaa ggtgacataa taggagatat aagacaagca cattgtaatg
721 tcagcagaac aaaatggaat agcactttac aacaggtggc tacacaatta aggaagtact
781 ccaatgccac aataaccttt gctaactcct caggagggga ttt
//
last modified: Tue May 31 10:56 2022