HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    HM745936		     804 bp    DNA     linear	VRL 13-MAR-2011
DEFINITION  HIV-1 isolate DL2075I7 from Guinea-Bissau envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   HM745936
VERSION     HM745936.1 GI:325505104
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 804)
            Show all sequences for reference 1
  AUTHORS   Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E.,
	    Nowroozalizadeh,S., Biague,A.J., da Silva,Z.J., Jansson,M.,
	    Fenyo,E.M., Norrgren,H. and Medstrand,P.
  TITLE     Inhibition of HIV-1 disease progression by contemporaneous HIV-2
	    infection.
  JOURNAL   N. Engl. J. Med.. 367(3); 224-32 (2012)
  PUBMED    22808957
REFERENCE   2 (bases 1 to 804)
            Show all sequences for reference 2
  AUTHORS   Esbjornsson,J., Mansson,F., Kvist,A., Isberg,P.-E., Biague,A.J., da
	    Silva,Z.J., Fenyo,E.M., Norrgren,H. and Medstrand,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2010) Experimental Medical Science, Molecular
	    Virology, BMC C13, Solvegatan 19, Lund 22184, Sweden
COMMENT     Subtype assigned by LANL database based on RIP and phylogenetic
	    tree.
FEATURES             Location/Qualifiers
     source	     1..804
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="DL2075I7"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Guinea-Bissau"
		     /collection_date="12-Jun-2007"
     gene	     <1..>804
		     /gene="env"
     CDS	     <1..>804
		     /gene="env"
		     /note="V1-V3"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADZ17406.1"
		     /db_xref="GI:325505105"
		     /translation="ILLENVTEDFNMWKNNIVEQMNEDIINLWDQSLKPCVKLTPLCV
		     TLNCSDTSGNTSTDMREEIKNCSFNMTTELRDKKQQVFALFYKLDVVQINNGSQYRLI
		     NCNTSAITQACPKVTFEPIPIHYCAPAGFAILKCRDKTFNGTGPCKNVSTVRCTHGIK
		     PVVSTQLLLNGSLAEEKVMIRSENITNNAKTIIAQLKTPVEITCIRPNNNTRKSVRIG
		     PGQTFYATDVIGDIRQAHCNVSNSSWTSALQQVAAQLREYFNTTIIFTN"
BASE COUNT	304 a	 145 c	  153 g    202 t
ORIGIN
       1 aaatactttt ggaaaatgta acagaagatt ttaacatgtg gaaaaataac atagtagaac 
      61 agatgaatga agatataatt aatctatggg accaaagcct aaaaccatgt gtaaagttaa 
     121 cccctctctg cgttacttta aattgtagcg acacctctgg caacacctct actgacatgc 
     181 gagaggaaat aaaaaattgc tctttcaata tgaccacaga actaagagat aagaaacagc 
     241 aagtgtttgc acttttttat aaacttgatg tagtacaaat taataatgga agccagtata 
     301 gattaataaa ctgtaatacc tcagccatta cacaggcttg tccaaaggta acctttgagc 
     361 caattcccat acattattgt gccccagctg gttttgcaat tctaaagtgt agggataaga 
     421 cgttcaatgg aacagggcca tgcaagaatg ttagcacagt acgatgtaca catggaatta 
     481 agccagtggt atcaactcaa ctgctgctaa atggcagtct agcagaagag aaggtaatga 
     541 ttagatctga aaatatcaca aataatgcca aaaccataat agcacagttg aagacgcctg 
     601 tagaaatcac gtgtatcaga cctaacaata atacaaggaa aagtgtacgt ataggaccag 
     661 ggcaaacatt ctatgcaaca gatgtaatag gggatataag acaagcacat tgtaatgtca 
     721 gtaactcaag ctggactagc gctttacaac aggtggctgc acaattaagg gagtacttta 
     781 acacaacaat aatctttact aact
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.