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LOCUS GU966563 882 bp RNA linear VRL 21-APR-2010
DEFINITION HIV-2 isolate V060880 from Belgium integrase (pol) gene, partial
cds
ACCESSION GU966563
VERSION GU966563.1 GI:294829070
KEYWORDS .
SOURCE Human immunodeficiency virus 2 (HIV-2)
ORGANISM Human immunodeficiency virus 2 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 882)
Show all sequences for reference 1
AUTHORS Perez-Bercoff,D., Triqueneaux,P., Lambert,C., Oumar,A.A.,
Ternes,A.-M., Goubau,P., Schmit,J.-C. and Ruelle,J.P.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2010) AIDS Reference Laboratory, UC Louvain,
Avenue Hippocrate 54 - UCL 5492, Bruxelles 1200, Belgium
REFERENCE 2
Show all sequences for reference 2
AUTHORS Perez Bercoff,D., Trinqueneaux,P., Lambert,C., Oumar,A.A.,
Ternes,A.M., Dao,S., Goubau,P., Schmit,J.C. and Ruelle,J.
TITLE Polymorphisms of HIV-2 integrase and selection of resistance to
raltegravir
JOURNAL Retrovirology 7 (1), 98 (2010)
PUBMED 21114823
FEATURES Location/Qualifiers
source 1..882
/organism="Human immunodeficiency virus 2"
/mol_type="genomic RNA"
/isolate="V060880"
/host="Homo sapiens"
/db_xref="taxon:11709"
/country="Belgium"
/collection_date="14-Jun-2006"
/note="group: A"
gene <1..882
/gene="pol"
CDS <1..882
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="integrase"
/protein_id="ADF42970.1"
/db_xref="GI:294829071"
/translation="FIERIEPAQEEHEKYHSNVKELSHKFRLPKLVARQIVNTCAQCQ
QKGEAIHGQVNAELGTWQIDCTHLEGKIIIVAVHVANGFIEAEVIPQESGRQTALFLL
KLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQTFGVPYNPQSQGVVEAMNHHLKN
QIDRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQEIQFLQAKNS
KLKNFRVYFREGRDQLWKGPGELLWKGDGAVIIKVGSEIKIVPRRKAKIIRDYGGRQE
LDSGPHLEGAREDGEVA"
BASE COUNT 338 a 158 c 219 g 167 t
ORIGIN
1 ttcatagaaa gaatagagcc cgctcaggaa gaacatgaaa aataccatag caatgtaaaa
61 gaactatccc acaaatttag attgcccaaa ctggtggcaa gacagatagt aaacacatgt
121 gcccaatgtc agcagaaagg ggaggccata catgggcaag taaatgcaga attaggcacc
181 tggcaaatag actgcacaca tttagaagga aaaatcatca tagtagcagt acatgttgca
241 aatggattca tagaggcaga agtcatccca caggaatcag ggaggcagac agcactcttc
301 ctgttaaaat tggctagtag gtggccaata acacacttac acacagataa tggtgccaac
361 ttcacttcac aggaagtgaa gatggtagca tggtggatag gtatagaaca gacctttgga
421 gtgccttaca atccacaaag ccaaggagta gtagaagcca tgaatcacca cctaaaaaat
481 cagatagaca ggatcagaga acaggcaaat acaatagaaa caatagtgtt aatggcagtc
541 cattgcatga attttaaaag aaggggagga ataggggata tgaccccatc agaaagacta
601 atcaatatga tcaccacaga acaagaaata caattcctcc aagcaaaaaa ttcaaaatta
661 aaaaattttc gggtctattt cagagaaggc agagatcagc tgtggaaagg acctggggaa
721 ctactgtgga agggggacgg agctgtcata atcaaggtag ggtcagagat aaagatagta
781 ccaagaagga aagccaagat tatcagagac tatggaggaa gacaagagct ggatagtggt
841 ccccacctgg agggtgccag ggaggatgga gaagtggcat ag
//
last modified: Tue May 31 10:56 2022