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LOCUS	    GU966563		     882 bp    RNA     linear	VRL 21-APR-2010
DEFINITION  HIV-2 isolate V060880 from Belgium integrase (pol) gene, partial
	    cds
ACCESSION   GU966563
VERSION     GU966563.1 GI:294829070
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 2 (HIV-2)
  ORGANISM  Human immunodeficiency virus 2 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 882)
            Show all sequences for reference 1
  AUTHORS   Perez-Bercoff,D., Triqueneaux,P., Lambert,C., Oumar,A.A.,
	    Ternes,A.-M., Goubau,P., Schmit,J.-C. and Ruelle,J.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2010) AIDS Reference Laboratory, UC Louvain,
	    Avenue Hippocrate 54 - UCL 5492, Bruxelles 1200, Belgium
REFERENCE   2
            Show all sequences for reference 2
  AUTHORS   Perez Bercoff,D., Trinqueneaux,P., Lambert,C., Oumar,A.A.,
	    Ternes,A.M., Dao,S., Goubau,P., Schmit,J.C. and Ruelle,J.
  TITLE     Polymorphisms of HIV-2 integrase and selection of resistance to
	    raltegravir
  JOURNAL   Retrovirology 7 (1), 98 (2010)
  PUBMED    21114823
FEATURES             Location/Qualifiers
     source	     1..882
		     /organism="Human immunodeficiency virus 2"
		     /mol_type="genomic RNA"
		     /isolate="V060880"
		     /host="Homo sapiens"
		     /db_xref="taxon:11709"
		     /country="Belgium"
		     /collection_date="14-Jun-2006"
		     /note="group: A"
     gene	     <1..882
		     /gene="pol"
     CDS	     <1..882
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="integrase"
		     /protein_id="ADF42970.1"
		     /db_xref="GI:294829071"
		     /translation="FIERIEPAQEEHEKYHSNVKELSHKFRLPKLVARQIVNTCAQCQ
		     QKGEAIHGQVNAELGTWQIDCTHLEGKIIIVAVHVANGFIEAEVIPQESGRQTALFLL
		     KLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQTFGVPYNPQSQGVVEAMNHHLKN
		     QIDRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPSERLINMITTEQEIQFLQAKNS
		     KLKNFRVYFREGRDQLWKGPGELLWKGDGAVIIKVGSEIKIVPRRKAKIIRDYGGRQE
		     LDSGPHLEGAREDGEVA"
BASE COUNT	338 a	 158 c	  219 g    167 t
ORIGIN
       1 ttcatagaaa gaatagagcc cgctcaggaa gaacatgaaa aataccatag caatgtaaaa 
      61 gaactatccc acaaatttag attgcccaaa ctggtggcaa gacagatagt aaacacatgt 
     121 gcccaatgtc agcagaaagg ggaggccata catgggcaag taaatgcaga attaggcacc 
     181 tggcaaatag actgcacaca tttagaagga aaaatcatca tagtagcagt acatgttgca 
     241 aatggattca tagaggcaga agtcatccca caggaatcag ggaggcagac agcactcttc 
     301 ctgttaaaat tggctagtag gtggccaata acacacttac acacagataa tggtgccaac 
     361 ttcacttcac aggaagtgaa gatggtagca tggtggatag gtatagaaca gacctttgga 
     421 gtgccttaca atccacaaag ccaaggagta gtagaagcca tgaatcacca cctaaaaaat 
     481 cagatagaca ggatcagaga acaggcaaat acaatagaaa caatagtgtt aatggcagtc 
     541 cattgcatga attttaaaag aaggggagga ataggggata tgaccccatc agaaagacta 
     601 atcaatatga tcaccacaga acaagaaata caattcctcc aagcaaaaaa ttcaaaatta 
     661 aaaaattttc gggtctattt cagagaaggc agagatcagc tgtggaaagg acctggggaa 
     721 ctactgtgga agggggacgg agctgtcata atcaaggtag ggtcagagat aaagatagta 
     781 ccaagaagga aagccaagat tatcagagac tatggaggaa gacaagagct ggatagtggt 
     841 ccccacctgg agggtgccag ggaggatgga gaagtggcat ag
//
last modified: Tue May 31 10:56 2022


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