View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS GU455498 2565 bp DNA linear VRL 02-MAR-2010
DEFINITION HIV-1 isolate 19663.9H2 from Netherlands envelope glycoprotein
(env) gene, complete cds
ACCESSION GU455498
VERSION GU455498.1 GI:289598034
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2565)
Show all sequences for reference 1
AUTHORS van Gils,M.J., Bunnik,E.M., Burger,J.A., Jacob,Y., Schweighardt,B.,
Wrin,T. and Schuitemaker,H.
TITLE Rapid escape from preserved cross-reactive neutralizing humoral
immunity without loss of viral fitness in HIV-1-infected
progressors and long-term nonprogressors.
JOURNAL J. Virol.. 84(7); 3576-85 (2010)
PUBMED 20071586
REFERENCE 2 (bases 1 to 2565)
Show all sequences for reference 2
AUTHORS van Gils,M.J., Bunnik,E.M., Burger,J.A., Jacob,Y., Schweighardt,B.,
Wrin,T. and Schuitemaker,H.
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2010) Experimental Immunology, AMC, Meibergdreef
9, Amsterdam, NH 1105 AZ, The Netherlands
FEATURES Location/Qualifiers
source 1..2565
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="19663.9H2"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Netherlands"
/collection_date="06-Jan-1987"
gene 1..2565
/gene="env"
CDS 1..2565
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADD12403.1"
/db_xref="GI:289598035"
/translation="MKVKGIRKNCQLLWRWGTMLLGILMICNATENLWVTVYYGVPVW
RETTTTLFCASDAKAYDTEVHNVWATHACVPTDPSPQEVVLENVTEEFNMWKNNMVEQ
MHEDIISLWDQSLKPCVKLTPLCVTLNCTDWNCTDSRNCTDSKNVSSEEKMEKGEIKN
CSFNITTNIRDKVQTEYAAFYKLDVVPINSNNDNTSFRLISCNTSVITQACPKVSFEP
IPIHYCAPAGFAILKCNDKKFSGKELCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEV
VIRSDNFTDNAKTIIVQLNESVEINCTRPNNNTRKSIHIGPGRAFYATGEIIGDIRRA
YCTINRAKWNNTLQQIVNKLREKFENKTIVFNQSSGGDPEIVMHSFNCGGEFFYCNST
QLFNSTWNGTAYNTEGNDTITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGL
LLTRDGGNNMNKTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREK
RAVGLGAMFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQL
TVWGIKQLQARVLAVERYLKDQQLMGIWGCSGKLICTTTVPWNASWSNKSLEKIWNNM
TWMEWEREIDNYTELIYTLIEESQNQQEKNEQELLELDKWASLWNWFNITNWLWYIKI
FIIIVGGLVGLRIVFTVLSIVNRVRQGYSPLSFQTRPPAPRGPDRPEGIEEEGGERDR
DRSGQLVDGLLAIIWVDLRSLCLFSYHRLRDLLLIVTRIVELLGRRGWEALKYWWNLL
QYWSRELKNSAVSLLNTIAIAVAEGTDRVIEVLQRAGRAILHIPVRIRQGLERALL"
BASE COUNT 898 a 425 c 613 g 629 t
ORIGIN
1 atgaaagtga aggggatcag gaagaattgt cagctcttgt ggagatgggg caccatgctc
61 cttgggatat taatgatttg taatgctaca gaaaatttgt gggtcacagt ctattatggg
121 gtacctgtgt ggagagaaac aaccaccact ctattttgtg catcagatgc taaagcatat
181 gatacagagg tacataatgt ttgggccaca catgcctgtg tacccacaga ccccagccca
241 caagaagtag tattggaaaa tgtgacagaa gagtttaaca tgtggaaaaa taacatggta
301 gaacagatgc atgaggacat aatcagttta tgggatcaaa gcttaaagcc atgtgtaaaa
361 ttaactccac tctgtgttac tttaaattgc actgattgga attgcactga ttcgaggaat
421 tgcactgatt cgaagaatgt gagtagcgag gaaaagatgg agaaaggaga aataaaaaac
481 tgttctttca atatcaccac aaacataaga gataaggtgc agacagaata tgcagctttt
541 tataagcttg atgtagtacc aataaatagt aataatgata ataccagctt taggttgata
601 agttgtaaca cctcagtcat tacacaggcc tgtccaaagg tatcctttga accaattccc
661 atacattatt gtgccccggc tggttttgcg attctaaagt gtaatgataa gaagttcagt
721 gggaaagaat tatgtaaaaa tgtcagcaca gtacaatgta cacatggaat taggccagta
781 gtatcaaccc aactgctatt aaatggcagt ctagcagaag aagaggtagt aattagatct
841 gataatttca cggacaatgc taaaaccata atagtacagc tgaacgaatc tgtagaaatt
901 aattgtacaa gacccaacaa caatacaaga aaaagtatac atataggacc agggagagca
961 ttttatgcaa caggagaaat aataggagat ataagacgag catattgtac cattaataga
1021 gcaaaatgga ataacacttt acaacagata gttaacaaat taagagaaaa atttgagaat
1081 aaaacaatag tctttaatca atcctcagga ggggacccag aaattgtaat gcacagtttt
1141 aattgtggag gggaattttt ctactgtaat tcaacacaac tgtttaatag tacttggaat
1201 ggtactgcat ataacactga aggaaatgac acaatcacac tcccatgcag aataaaacaa
1261 attataaaca tgtggcagga agtaggaaaa gcaatgtatg cccctcccat cagaggacaa
1321 attagatgtt catcaaatat tacagggctg ctattaacaa gagatggtgg taataacatg
1381 aacaagaccg agatcttcag acctggagga ggagatatga gggacaattg gagaagtgaa
1441 ttatataaat ataaagtagt aaaaattgaa ccattaggag tagcacccac caaggcaaag
1501 agaagagtgg tgcagagaga aaaaagagca gtgggactag gagctatgtt ccttgggttc
1561 ttgggagcag caggaagcac tatgggcgca gcgtcaatga cgctgacggt acaggccaga
1621 ctattattgt ctggtatagt gcaacagcag aacaatttgc tgagggctat tgaggcgcaa
1681 cagcacctgt tgcaactcac agtctggggc atcaagcagc tccaggcaag agtcctggct
1741 gtggaaagat acctaaagga tcaacagctc atggggattt ggggttgctc tggaaaactc
1801 atttgcacca ctactgtgcc ttggaatgct agttggagta ataaatctct ggagaagatt
1861 tggaataaca tgacctggat ggagtgggag agagaaattg acaattacac agagttaata
1921 tacaccttaa ttgaagaatc gcagaaccaa caagaaaaga atgaacaaga attattggaa
1981 ttagataaat gggcaagttt gtggaattgg tttaacataa caaattggct gtggtatata
2041 aaaatattca taataatagt aggaggcttg gtaggtttaa gaatagtttt tactgtactt
2101 tctatagtga atagagttag gcagggatac tcaccattat cgtttcagac ccgcccccca
2161 gccccgaggg gacccgacag gcccgaagga atcgaagaag aaggtggaga gagagacaga
2221 gacagatccg gtcaattagt ggatggatta ttagcaatta tctgggtcga cctacggagc
2281 ctgtgcctct tcagctacca ccgcttgaga gacttactct tgattgtaac gaggattgtg
2341 gaacttctgg gacgcagggg gtgggaagcc ctcaaatatt ggtggaatct actacagtat
2401 tggagtcggg aactaaagaa tagtgctgtt agcttgctca ataccatagc catagcagta
2461 gctgagggga cagatagggt tatagaagta ttacaaagag ctggtagagc tatcctccac
2521 atacctgtaa gaataagaca gggcttggaa agggctttgc tataa
//
last modified: Tue May 31 10:56 2022