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LOCUS GU455464 2589 bp DNA linear VRL 02-MAR-2010
DEFINITION HIV-1 isolate 19554.16.1E2 from Netherlands envelope glycoprotein
(env) gene, complete cds
ACCESSION GU455464
VERSION GU455464.1 GI:289597966
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2589)
Show all sequences for reference 1
AUTHORS van Gils,M.J., Bunnik,E.M., Burger,J.A., Jacob,Y., Schweighardt,B.,
Wrin,T. and Schuitemaker,H.
TITLE Rapid escape from preserved cross-reactive neutralizing humoral
immunity without loss of viral fitness in HIV-1-infected
progressors and long-term nonprogressors.
JOURNAL J. Virol.. 84(7); 3576-85 (2010)
PUBMED 20071586
REFERENCE 2 (bases 1 to 2589)
Show all sequences for reference 2
AUTHORS van Gils,M.J., Bunnik,E.M., Burger,J.A., Jacob,Y., Schweighardt,B.,
Wrin,T. and Schuitemaker,H.
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2010) Experimental Immunology, AMC, Meibergdreef
9, Amsterdam, NH 1105 AZ, The Netherlands
FEATURES Location/Qualifiers
source 1..2589
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="19554.16.1E2"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Netherlands"
/collection_date="01-Nov-1988"
gene 1..2589
/gene="env"
CDS 1..2589
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADD12369.1"
/db_xref="GI:289597967"
/translation="MRAKEIRKNWQHWWKWGIMLLGMLMICSAEEEGKWVTVYYGVPV
WKEATTTLFCASDAKASDTEVHNVWATHACVPTDPNPQEVVLVNVTENFNMWKNNMVE
QMHEDIISLWDESLKPCVKLTPLCVTLNCTNVKINETNTNITKASNTTTNITRWERME
EGEIKNCSFNVTTAIGNKMQKNYALFYRLDVVPMNDDNTSYTLINCNTSVITQACPKV
SFEPIPIHYCTPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLA
EEDIVIRSENFTNNAKTIIVQLNESVVINCTRPNNNTRKSVHMGPGRVWYATGDIIGN
IRQAHCTLNRAKWTNTLRQVVEKLREQFGNKTIAFNQSSGGDPEIVLHSFNCGGEFFY
CNTTQLFNSNWPFNGTWNDTNNESNITLPCRIKQIINRWQEVGKAMYAPPIQGLIKCS
SNITGLLLTRDGGNGTENGTETFRPGGGNMRDNWRSELYKYKVVKIEPLGVAPTKAKR
RVVQREKRAVGTIGAMFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLKAIE
AQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKIICTTSVPWNDSWSNKS
LKHIWENMTWMEWEREIDNYTSLIYTLIEESQIQQEKNEQELLELDKWASLWNWFTIT
NWLWYIKIFIMIVGGLVGFRIVFAVLSIANRVRQGYSPLSFQIRPPAPRGPDRPEGIE
EEGGDRDRDRSNHSVPGFFILIWDDLWSLCIFSYHRLRDLLLIAARIVELLGRRGWEA
LKYWWNLLQYWSQELKKSAISLLNATAITVAEGTDRVIEVVQRACRAILHIPRRIRQG
LERALQ"
BASE COUNT 900 a 450 c 615 g 624 t
ORIGIN
1 atgagagcga aggagatcag gaagaattgg cagcactggt ggaaatgggg catcatgctc
61 cttggaatgt tgatgatctg tagtgctgaa gaagaaggaa agtgggtcac agtctattat
121 ggggtacctg tgtggaaaga agcaaccact actctatttt gtgcctcaga tgctaaagca
181 tctgacacag aggtacataa tgtttgggcc acacatgcct gtgtacccac agaccctaac
241 ccacaagaag tagtattggt aaatgtgaca gaaaatttta acatgtggaa aaataacatg
301 gtagaacaga tgcatgagga tataatcagc ttatgggatg aaagcctaaa gccatgtgta
361 aaattaaccc cactctgtgt caccctaaat tgtactaatg tgaagataaa tgagactaat
421 accaatatta ctaaggccag taatactact accaatatta cacggtggga aaggatggag
481 gaaggagaaa taaagaactg ctcttttaat gtcaccacag ccataggaaa taagatgcag
541 aaaaactatg cactttttta tagacttgat gtagtaccaa tgaatgatga taatacaagt
601 tatacattga taaattgtaa cacctcagtc attacacaag cctgtccaaa ggtatccttt
661 gaaccaattc ccatacatta ttgtaccccg gctggttttg cgattctaaa gtgtaatgat
721 aagaagttca atggaacagg accatgtaca aatgttagta cagtacaatg tacacatgga
781 attaggccag tagtatcaac tcaattgctg ttaaatggca gtctagcaga agaagatata
841 gtaattagat ctgaaaattt cacgaacaat gctaaaacca taatagtaca gctgaatgaa
901 tctgtagtaa ttaattgtac aagacccaac aacaatacaa gaaaaagtgt acacatggga
961 ccggggaggg tatggtatgc aacaggagac ataataggaa atataagaca agcacattgt
1021 acccttaata gagcaaaatg gactaacact ttaagacagg tagttgaaaa attaagagaa
1081 caatttggga ataaaacaat agccttcaat caatcctcag gaggggaccc agaaattgta
1141 ttgcacagtt ttaattgtgg aggggaattt ttctactgta atacaacaca gctgtttaat
1201 agtaattggc cgtttaatgg tacttggaat gatactaaca acgaaagtaa tatcacactc
1261 ccatgcagaa taaaacaaat tataaacagg tggcaggaag taggaaaagc aatgtatgcc
1321 cctcccatcc aaggactaat taaatgttca tcaaatatta cagggctgtt attaacaaga
1381 gatggtggta acgggaccga gaatgggacc gagaccttca gacctggggg aggaaatatg
1441 agagacaatt ggagaagtga attatataaa tataaagtag ttaaaattga gccattagga
1501 gtagcaccca ccaaggcaaa gagaagagtg gtgcaaagag aaaaaagagc agtgggaacg
1561 ataggagcta tgttccttgg gttcttggga gcagcaggaa gcactatggg cgcagcgtca
1621 gtgacgctga cggtacaggc cagacaatta ttgtctggta tagtgcaaca gcagaacaat
1681 ctgctgaaag ctattgaggc gcaacagcat ctgttgcaac tcacagtctg gggcatcaag
1741 cagctccagg caagagtcct ggctgtggaa agatacctaa gggatcaaca gctcctaggg
1801 atttggggtt gctctggaaa aatcatttgc accacttctg tgccttggaa tgatagttgg
1861 agtaataaat ctctgaaaca tatttgggaa aacatgacct ggatggagtg ggagagagaa
1921 attgacaatt acacaagcct aatatacacc ttaattgaag aatcgcagat ccaacaggaa
1981 aaaaatgaac aagagttatt ggaattggat aagtgggcaa gtttgtggaa ttggtttacc
2041 ataacaaact ggctgtggta tataaaaata ttcataatga tagtaggagg tttagtaggc
2101 ttcagaatag tttttgctgt gctttctata gcgaatagag ttaggcaggg atactcacca
2161 ctatcatttc agatccgccc cccagcccca aggggacccg acaggcccga aggaatcgaa
2221 gaagaaggtg gagacagaga cagagacaga tccaatcact cagtgcctgg attcttcata
2281 ctcatctggg acgacctttg gagcctgtgc atcttcagtt accaccgctt gagagactta
2341 ctcttgattg cagcgaggat tgtggaactt ctgggacgca gggggtggga agccctcaaa
2401 tattggtgga atctcctgca gtattggagc caggaactaa agaagagtgc cattagtttg
2461 cttaatgcta cagctataac agtagctgag gggacagata gggttataga agtagtacaa
2521 agagcttgta gagctattct ccacatacct agaagaataa gacaaggctt agaaagggct
2581 ttgcaataa
//
last modified: Tue May 31 10:56 2022