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LOCUS GU191622 1575 bp RNA linear VRL 13-DEC-2009
DEFINITION Human immunodeficiency virus isolate CDF0011 pol protein (pol)
gene, partial cds
ACCESSION GU191622
VERSION GU191622.1 GI:270312816
KEYWORDS .
SOURCE Human immunodeficiency virus
ORGANISM Human immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group; unclassified Primate lentivirus group
REFERENCE 1 (bases 1 to 1575)
Show all sequences for reference 1
AUTHORS Aghokeng,A.F., Vergne,L., Mpoudi-Ngole,E., Mbangue,M., Deoudje,N.,
Mokondji,E., Nambei,W.S., Peyou-Ndi,M.M., Moka,J.J., Delaporte,E.
and Peeters,M.
TITLE Evaluation of transmitted HIV drug resistance among
recently-infected antenatal clinic attendees in four Central
African countries
JOURNAL Antivir. Ther. (Lond.) 14 (3), 401-411 (2009)
PUBMED 19474474
REFERENCE 2 (bases 1 to 1575)
Show all sequences for reference 2
AUTHORS Aghokeng,A.F., Vergne,L., Mpoudi-Ngole,E., Mbangue,M., Deoudje,N.,
Mokondji,E., Nambei,W.S., Peyou-Ndi,M.M., Moka,J.-J.L.,
Delaporte,E. and Peeters,M.
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2009) Virology Laboratory IMPM-IRD, Rue Elig
Essono Mballa, Yaounde, Centre 1857, Cameroon
FEATURES Location/Qualifiers
source 1..1575
/organism="Human immunodeficiency virus"
/mol_type="genomic RNA"
/isolate="CDF0011"
/host="Homo sapiens"
/db_xref="taxon:12721"
/country="Cameroon"
/collection_date="2007"
gene <1..>1575
/gene="pol"
CDS <1..>1575
/gene="pol"
/note="contains protease and 5'' end of reverse
transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACZ73501.1"
/db_xref="GI:270312817"
/translation="PQITLWQRPLVIVRIEGQLIEALLDTGADDTVLEDINLPGKWKP
KMIGGIGGFIKVRQYDQIHIEIXGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICSEMEKEGKISRIGPENPYNTPVF
AIKKKDGTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPYRTNNPE
MVIYQYMDDLYVGSDLEIGQHRAKIEELRKHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQHIQLPEKDSWTVNDIQKLVGKLNWASQIFAGIKVKQLCKLLRGAKALTDIV
TLTEEAELELAENREILKEPVHGVYYDPTKDLVAEIQKQGQDQWTYQVYQEPYKNLKT
GKYAKRRSAHTNDVKQLTEVVQKVATESIIIWGKTPKFRLPIQKETWEAWWMEYWQAT
WIPEWEFVNTPPLVKLW"
BASE COUNT 626 a 254 c 336 g 354 t 5 other
ORIGIN
1 cctcaaatca ctctttggca gcgaccctta gtcatagtaa gaatagaggg acaactaata
61 gaagccctat tagacacagg agcagatgat acagtattag aagacataaa tttaccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta ttaaagtaag acagtatgat
181 cagatacata tagaaatttg kgggaaaaaa gccataggta cagtattagt aggacctaca
241 cctgtcaaca taattgggcg aaatatgttg actcagattg ggtgtacttt aaattttcca
301 attagtccta ttgaaactgt gccagtaaaa ttgaagccag gaatggatgg cccaaaagtc
361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagagatatg ttcagagatg
421 gaaaaggaag gaaaaatttc aagaattggg cctgaaaatc catacaatac tccagtwttt
481 gccataaara aaaaagatgg tactaaatgg agaaaattag tagatttcag agaacttaat
541 aagagaactc aagacttctg ggaggtccaa ctaggaatac ctcatcccgc aggattaaaa
601 aaraaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccctagat
661 aaggacttta gaaagtacac tgcattcact atacctagtg taaataatga gacaccaggg
721 attagatatc agtacaatgt gctgccacag ggatggaaag gatcmccagc aatatttcag
781 gcaagcatga caaaaatctt agagccctat agaacaaaca atccagagat ggtgatctac
841 caatatatgg atgatttata tgtaggatca gacttagaaa taggacagca tagagcaaaa
901 atagaggagt taagaaaaca tctactgaag tggggattta ccacaccaga caaaaaacat
961 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc
1021 cagcatatac agctgccaga aaaagacagc tggactgtca atgatataca gaaattagta
1081 ggaaaactaa attgggcaag tcagattttt gcaggaatta aagtaaagca actgtgtaaa
1141 ctcctcaggg gggccaaagc actaacagat atagtaacac tgactgagga agcagaatta
1201 gaattggcag agaacaggga aattctaaaa gaacctgtac atggagtata ttatgatcca
1261 acaaaagact tagtagcaga aatacagaaa caaggacaag accaatggac ttatcaagtt
1321 tatcaagagc catataaaaa tctgaaaaca ggaaaatatg caaaaaggag gtctgcccac
1381 actaatgatg taaaacaatt gacagaggta gtgcaaaagg tggctacaga aagcataata
1441 atatggggaa agactcctaa atttaggtta cccatacaaa aagaaacatg ggaagcatgg
1501 tggatggagt attggcaggc tacctggatt cctgaatggg aatttgtcaa tacccctcct
1561 ctagtaaaat tatgg
//
last modified: Tue May 31 10:56 2022