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LOCUS GU191566 1575 bp RNA linear VRL 13-DEC-2009
DEFINITION Human immunodeficiency virus isolate CYR018 pol protein (pol) gene,
partial cds
ACCESSION GU191566
VERSION GU191566.1 GI:270312704
KEYWORDS .
SOURCE Human immunodeficiency virus
ORGANISM Human immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group; unclassified Primate lentivirus group
REFERENCE 1 (bases 1 to 1575)
Show all sequences for reference 1
AUTHORS Aghokeng,A.F., Vergne,L., Mpoudi-Ngole,E., Mbangue,M., Deoudje,N.,
Mokondji,E., Nambei,W.S., Peyou-Ndi,M.M., Moka,J.J., Delaporte,E.
and Peeters,M.
TITLE Evaluation of transmitted HIV drug resistance among
recently-infected antenatal clinic attendees in four Central
African countries
JOURNAL Antivir. Ther. (Lond.) 14 (3), 401-411 (2009)
PUBMED 19474474
REFERENCE 2 (bases 1 to 1575)
Show all sequences for reference 2
AUTHORS Aghokeng,A.F., Vergne,L., Mpoudi-Ngole,E., Mbangue,M., Deoudje,N.,
Mokondji,E., Nambei,W.S., Peyou-Ndi,M.M., Moka,J.-J.L.,
Delaporte,E. and Peeters,M.
TITLE Direct Submission
JOURNAL Submitted (12-NOV-2009) Virology Laboratory IMPM-IRD, Rue Elig
Essono Mballa, Yaounde, Centre 1857, Cameroon
FEATURES Location/Qualifiers
source 1..1575
/organism="Human immunodeficiency virus"
/mol_type="genomic RNA"
/isolate="CYR018"
/host="Homo sapiens"
/db_xref="taxon:12721"
/country="Cameroon"
/collection_date="2006"
gene <1..>1575
/gene="pol"
CDS <1..>1575
/gene="pol"
/note="contains protease and 5'' end of reverse
transcriptase"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACZ73445.1"
/db_xref="GI:270312705"
/translation="PQITLWQRPJVKVRIEGQLIEALLDTGADDTVLEDINLPGKWKP
KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICMEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDENFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPE
IVIYQYMDDLYVGSDLNIEQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQXIQLPEKDHWTVNDIQKLVGKLNWASQIYAGIKVKQLCRLLRGAKALTDIV
TLTKEAELELAENREILKEPVHGVYYDPAKDLVAEIQKQGQDQWTYQIYQEPFKNLKT
GKYAKRXSAHTNDVKQLTEVVQKVSQESIVIWGKTPKFRLPIQKETWEAWWLEYWQAT
WIPEWEFVNTPPLVKLW"
BASE COUNT 624 a 249 c 330 g 362 t 10 other
ORIGIN
1 cctcaaatca ctctttggca acgacccwta gtaaaagtaa gaatagaggg acagctaata
61 gaagctctat tagacacagg agcagatgat acagtattag aggacataaa tttaccagga
121 aaatggaaac caaaaatgat agggggaatt gggggtttta tcaaagtaag acaatatgat
181 cagatactta tagaaatttg tgggaaaaag gctataggta cagtgttagt aggacctaca
241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaattttcca
301 attagtccaa ttgaaactgt accagtaaaa ttaaagccag gaatggatgg tccaaaggtt
361 aaacaatggc cattgacaga agaaaaaata aaggcattaa cagaaatttg tatggagatg
421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catataatac tccagtattt
481 gccataaaga aaaaagatag tactaaatgg agaaaattag tagatttcag agaactcaat
541 aaaagaactc aagatttctg ggaggtccaa ctaggaatac ctcaccccgc gggattaaaa
601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccttagat
661 gaaaacttta gaaagtatac tgcattcact atacctagta taaacaatga gacaccgggg
721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatatttcag
781 gctagcatga caaaaatctt agagcccttt agaacaaaaa atccagagat tgtgatttac
841 caatatatgg atgatttata tgtaggatct gacttaaata tagagcagca tagagcaaaa
901 atagaggagt taagagaaca tctactgaga tggggattta ccacaccaga caaaaaacat
961 cagaaggaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc
1021 cagmccatac agctaccaga aaaggaccay tggactgtca atgatataca gaaattagtg
1081 ggaaaattaa actgggcaag tcagatttat gcaggaatta aagtaaaaca aytrtgtaga
1141 cttctcaggg gagccaaagc actgacagat atagtaacac tgactaagga agcagaatta
1201 gaattggcag araacaggga aattctaaaa gaacctgtac atggagtcta ttatgaccca
1261 gcaaaagayc tagtagcaga aatacagaaa caagggcaag accaatggac atatcaaatt
1321 tatcaagagc catttaaaaa tctaaaaaca ggaaaatatg caaaaaggar gtctgcccac
1381 actaatgatg taaaacaatt aacagaggta gtrcaaaagg tgtctcaaga aagcatagta
1441 atatggggaa agacccctaa gtttagacta cccatacaaa aagaaacatg ggaagcatgg
1501 tggytggagt attggcaggc tacctggatt cctgaatggg agtttgtcaa tacccctcct
1561 ctagtaaaat tatgg
//
last modified: Tue May 31 10:56 2022