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LOCUS GU191446 2589 bp RNA linear VRL 09-FEB-2010
DEFINITION HIV-1 isolate 091-WK48 clone 21 from Canada envelope glycoprotein
(env) gene, complete cds
ACCESSION GU191446
VERSION GU191446.1 GI:288189462
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2589)
Show all sequences for reference 1
AUTHORS McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
Tremblay,C.L. and Strizki,J.M.
TITLE Characterization of emergent HIV resistance in treatment-naive
subjects enrolled in a vicriviroc phase 2 trial.
JOURNAL J. Infect. Dis.. 201(10); 1470-80 (2010)
PUBMED 20373959
REFERENCE 2 (bases 1 to 2589)
Show all sequences for reference 2
AUTHORS McNicholas,P., Wei,Y., Whitcomb,J., Greaves,W., Black,T.A.,
Tremblay,C.L. and Strizki,J.M.
TITLE Direct Submission
JOURNAL Submitted (11-NOV-2009) Biological Research-Virology, Schering
Plough Research Institute, 2015 Galloping Hill Road, K15/
E405/4945, Kenilworth, NJ 07033, USA
COMMENT Sampling date corrected by authors; it is Jan 11, 2005, not Nov
1,2005 [JM 8/2010].
FEATURES Location/Qualifiers
source 1..2589
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="091-WK48"
/isolation_source="plasma sample of subject enrolled in a
clinical trial"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="21"
/country="Canada"
/collection_date="03-Nov-2005"
gene 1..2589
/gene="env"
CDS 1..2589
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADC43127.1"
/db_xref="GI:288189463"
/translation="MKVKGIKRNYPHLWIWGTMLLGMLLMSYSAANNLWVTVYYGVPV
WKEANATLFCASDAKAYETEAHNIWATHACVPTDPNPQEIELKNVTEDFNMWKNNMVE
QMHEDIISLWDQSLKPCVKLTPLCVTLNCTNAISENNCANTTSGDNNATLNNNCSIPE
MKNCSFNVTTVLRDKQKQEYALFYKLDIVGIGLDNTSYRLINCNTSAMTQACPKISFE
PIPIHYCAPAGFAILKCNDKKFNGTGPCQNVSTVQCTHGIRPVVSTQLLLNGSLAEEE
IIIRSENLTNNAKNIIVQFNESVEISCIRPNNNTIKSVHLGPWQAFYATNGIIGDIRK
AHCNITRTAWNNTLQKVAQTLGELYNETSIIFKPSSGGDSEITTHSFNCGGEFFYCNT
SGLFDGTWNSSTRTWTWLNSNETNTIVTIPCRIKQIINMWQGVGKAMYAPPIKGVIKC
TSNITGIILTRDGGKNATNETFRPGGGNMKDNWRSELYKYKVVRIEPLGVAPTRAKRR
VVEREKRAIGLGAVFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQ
QHLLQLTVWGIKQLQARILAVERYLKDQQFLGVWGCSGKHICTTNVPWNSSWSNNKSL
DYIWQNMTWRQWEKEIEQYTGVIYTLIEESQIQQENNEKELLELDKWANLWNWFDITQ
WLWYIKIFIIIVGGLIGLRIVFAILSIVRRVRQGYSPLSFQTLFPIPRGRPDGPEGIE
EEGGEQGRGNSIRLVNGFLALFWDDLRNLCLFSYHRLRDLVLITARIVDLLGRGGWEA
LKYLWNLLGYWSQELKNSAISLYNTTAIAVAEGTDRIIEIVQRACRAILNIPRRIRQG
LERALL"
BASE COUNT 918 a 446 c 596 g 629 t
ORIGIN
1 atgaaagtga aggggataaa gaggaattat ccacacttgt ggatatgggg cacgatgctc
61 cttgggatgt tgctgatgag ctatagtgca gcaaataatt tgtgggttac agtatattat
121 ggggtgcctg tatggaaaga agcaaatgcc actctatttt gtgcatcaga tgctaaagca
181 tacgaaacag aggcacataa tatctgggct acacatgcct gtgtacccac ggaccccaat
241 ccacaggaaa tagaactaaa aaatgtcaca gaagacttta acatgtggaa aaataacatg
301 gtggagcaga tgcatgagga tataatcagt ctatgggacc agagcctaaa accatgtgta
361 aaattaaccc cactatgtgt cactttaaat tgcactaatg ctatctcgga aaacaactgc
421 gctaatacta catcgggaga caacaatgct acattaaata acaactgcag catcccagaa
481 atgaaaaact gctctttcaa tgtaaccaca gtattaaggg ataagcaaaa gcaagaatat
541 gcactttttt ataaacttga tatagtagga ataggtcttg ataatacttc ttataggtta
601 ataaattgta atacctcagc catgacacag gcttgtccaa agatatcctt tgagccaatt
661 cccatacatt attgtgcccc agctggattt gcaattctaa aatgtaatga taagaagttc
721 aatggaacag gcccatgcca aaatgttagc acagtacaat gtacacatgg aatcaggcca
781 gtagtgtcaa ctcaattgct gttaaatggc agtctagcag aagaagagat cataattaga
841 tctgagaatc tcacaaacaa tgctaaaaac ataatagtgc aatttaatga atctgtagaa
901 attagttgta taaggcctaa caacaataca ataaaaagtg tacacttagg accatggcag
961 gcattctatg caacaaacgg aataatagga gacataagga aagcacattg taatattact
1021 aggacagcct ggaataacac gctacaaaag gtagcccaaa cattaggaga actctataac
1081 gaaacaagca taatttttaa accatcctca ggaggagact cagaaattac aacacacagt
1141 tttaattgtg gaggggaatt tttctattgc aatacatcag gactgtttga tggaacatgg
1201 aatagtagta caaggacatg gacatggctt aacagtaatg aaactaatac aattgtaacc
1261 atcccatgta gaataaaaca aattataaac atgtggcagg gagtaggaaa agcaatgtat
1321 gcccctccca tcaaaggagt aattaagtgt acatcaaata ttacagggat aatattgaca
1381 agagatggtg gtaagaatgc tactaatgag accttcaggc ctgggggagg aaatatgaag
1441 gacaattgga gaagtgaatt atataaatat aaagtagtaa gaattgaacc attaggagta
1501 gcacctacca gggcaaagag aagagtggtg gagagagaaa aaagagcaat aggactggga
1561 gctgtgttcc ttggtttctt gggagcagca ggaagcacga tgggcgcagc gtcattgacg
1621 ctgacggtac aggccagaca attattgtct ggtatagtgc aacagcaaaa taatttgctg
1681 agggctatag aggcgcaaca acatctgttg caactcacgg tctggggcat taaacagctc
1741 caggcaagaa tcctggctgt ggaaagatac ctaaaggatc aacagttcct aggagtttgg
1801 ggttgctctg gaaaacacat ttgcaccact aatgtaccct ggaactctag ttggagtaat
1861 aataaatctc tagactatat ttggcagaac atgacatgga ggcaatggga gaaagaaatt
1921 gaacaataca caggtgtaat atacacctta attgaagaat cacaaatcca gcaagaaaac
1981 aatgaaaaag aattattaga attggacaaa tgggcaaatt tgtggaattg gtttgacata
2041 actcaatggc tgtggtatat aaaaatattc attataatag tagggggctt aatagggttg
2101 agaatagttt ttgctatact ttctatagtg agaagagtta ggcagggata ctcacctctg
2161 tcgtttcaga cccttttccc aatcccgagg ggacgacccg acgggcccga aggaatagaa
2221 gaagaaggtg gagagcaagg cagaggcaac tcaattcgat tggtgaacgg attcttagca
2281 ctcttctggg acgatctgag gaacctgtgc ctcttcagct accaccgctt gagagactta
2341 gtcttgatca cagcgaggat tgtggacctt ctgggacgcg gggggtggga agcactcaaa
2401 tatctgtgga atctcctagg gtattggagt caggaactga agaatagtgc tattagtttg
2461 tataacacca cagcaatagc agtagctgag gggacagata ggatcataga aatagtacag
2521 agagcttgta gggctattct taacataccc agaagaataa gacaaggttt agaaagagct
2581 ttgctataa
//
last modified: Tue May 31 10:56 2022