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LOCUS	    GQ859333		    1722 bp    DNA     linear	VRL 06-OCT-2009
DEFINITION  HIV-1 clone LSC63T1201gp1202-2 from USA envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   GQ859333
VERSION     GQ859333.1 GI:260179492
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1722)
            Show all sequences for reference 1
  AUTHORS   Liu,Y., Woodward,A., Zhu,H., Andrus,T., McNevin,J., Lee,J.,
	    Mullins,J.I., Corey,L., McElrath,M.J. and Zhu,T.
  TITLE     Preinfection human immunodeficiency virus (HIV)-specific cytotoxic
	    T lymphocytes failed to prevent HIV type 1 infection from strains
	    genetically unrelated to viruses in long-term exposed partners
  JOURNAL   J. Virol. 83 (20), 10821-10829 (2009)
  PUBMED    19706711
REFERENCE   2 (bases 1 to 1722)
            Show all sequences for reference 2
  AUTHORS   Liu,Y., Woodward,A., Zhu,H., Andrus,T., McNevin,J., Lee,J.,
	    Mullins,J.I., Corey,L., McElrath,M.J. and Zhu,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2009) Laboratory Medicine, University of
	    Washington, Campus Box 358070, Seattle, WA 98195, USA
FEATURES             Location/Qualifiers
     source	     1..1722
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolation_source="LSC63 T cells"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="LSC63T1201gp1202-2"
		     /country="USA"
		     /collection_date="Dec-2001"
     gene	     <1..>1722
		     /gene="env"
     CDS	     <1..>1722
		     /gene="env"
		     /note="contains gp120"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ACX34380.1"
		     /db_xref="GI:260179493"
		     /translation="TVMGTRRNYQHLWKWGTMLLGILMICSATENLWVTVYYGVPVWK
		     EAITTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLKNVTENFNMWKNNMVEQM
		     HEDIISLWDQSLKPCVELTPLCVTLNCSDLNVNSTDLKNVTNWEIREKGGIKNCSFNT
		     TTSMTDKRQKEYALFYRMDIVPLDDSPKNSSNYTNYRLISCNTSVITQACPKVSFEPI
		     PIHYCAPAGFAILKCNDKKFNGTGACTNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIV
		     IRSENFSDNAKTILVQLKDAVQINCTRPSNNTSKGIHIGPGRAFYTTGRIIGDIRQAH
		     CNISGLQWNNTLRQIAEKLRKQFNNETTIVFKNSSGGDPEIVMHSFNCGGEFFYCNST
		     KLFNSTWDKNNIEGFNNTGGSNDTITLQCRIKQIINMWQKVGKAMYAPPIRGQIRCTS
		     NITGLILTRDGGNNNNNTHETFRPGGGNMKDNWRSELYKYKVVRIEPLGVAPTRAKRR
		     VVQREKRAVGIGALFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQ
		     QHLLQLTV"
BASE COUNT	633 a	 291 c	  382 g    416 t
ORIGIN
       1 acagtgatgg ggaccaggag gaattatcag cacttgtgga aatggggcac catgctcctt 
      61 gggatattga tgatctgtag tgctacagaa aacttgtggg tcacagtcta ttatggggta 
     121 cctgtgtgga aagaagcaat caccactcta ttttgcgcat cagatgctaa agcatatgat 
     181 acagaggtac ataatgtttg ggccacacat gcctgtgtac ccacagaccc caacccacaa 
     241 gaagtagtat tgaaaaatgt gacagaaaat tttaacatgt ggaaaaataa catggtggaa 
     301 cagatgcatg aggatataat cagtttatgg gatcaaagcc taaagccatg tgtagaatta 
     361 accccactct gtgttactct aaattgctct gatctgaatg ttaatagcac tgatctgaag 
     421 aatgttacta actgggaaat aagggaaaaa ggaggaataa aaaactgttc tttcaatacc 
     481 accacaagca tgacagataa gagacagaaa gagtatgcat tgttttatag aatggatata 
     541 gtaccattag atgatagtcc taaaaatagt tctaattata ccaactatag gctgataagt 
     601 tgtaacacct cagtcattac acaggcctgt ccaaaggtct cctttgagcc aattcccata 
     661 cattattgtg ccccggctgg ttttgcgatt ctaaaatgca atgataagaa attcaatgga 
     721 acaggagcat gtacaaatgt cagcacagta cagtgtacac atgggattaa gccagtagta 
     781 tcaactcaac tgctgttaaa tggcagtcta gcagaagaag agatagtaat tagatctgaa 
     841 aatttctcag acaatgctaa aaccatatta gtacagctga aagacgctgt acagattaat 
     901 tgtacaagac ccagtaacaa tacaagtaaa ggtatacata taggaccagg gagagcattt 
     961 tatacaacag gaagaataat aggagatata agacaagcac attgtaacat tagtggttta 
    1021 caatggaata acactttaag acagatagct gaaaaattaa ggaagcaatt taacaatgaa 
    1081 acaacaatag tctttaaaaa ctcctcagga ggggacccag aaattgtaat gcatagtttt 
    1141 aattgtgggg gggaattttt ctactgtaat tcaacaaaac tatttaatag tacctgggat 
    1201 aagaataata ttgaagggtt taataatact ggagggtcaa atgacaccat cacactccaa 
    1261 tgcagaataa aacaaattat aaacatgtgg cagaaagtag gaaaagcaat gtatgcccct 
    1321 cccatcagag gacaaattag atgtacatca aatattacag ggctgatatt aacaagagat 
    1381 ggaggtaata ataacaataa cacccacgag accttcagac caggaggagg aaatatgaag 
    1441 gataattgga gaagtgaatt atataaatat aaagtagtaa gaattgaacc attaggggta 
    1501 gcacccacca gggcaaagag gagagtggtg cagagagaaa aaagagcagt aggaatagga 
    1561 gccttgttcc ttgggttctt gggagcagca ggaagcacta tgggcgcagc gtcactgacg 
    1621 ctgacggtac aggccagaca attattgtct ggtatagtgc aacagcagaa caacttgctg 
    1681 agggctatag aggcgcaaca gcatctgttg caactcacag tc
//
last modified: Tue May 31 10:56 2022


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