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LOCUS	    GQ444183		     612 bp    RNA     linear	VRL 02-OCT-2009
DEFINITION  HIV-1 isolate IS8838_PL_5 from USA envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   GQ444183
VERSION     GQ444183.1 GI:259014258
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 612)
            Show all sequences for reference 1
  AUTHORS   Heath,L., Fox,A., McClure,J., Diem,K., van 't Wout,A.B., Zhao,H.,
	    Park,D.R., Schouten,J.T., Twigg,H.L. I.I.I, Twigg,H.L., Corey,L.,
	    Mullins,J.I. and Mittler,J.E.
  TITLE     Evidence for limited genetic compartmentalization of HIV-1 between
	    lung and blood
  JOURNAL   PLoS ONE 4 (9), E6949 (2009)
  PUBMED    19759830
REFERENCE   2 (bases 1 to 612)
            Show all sequences for reference 2
  AUTHORS   Heath,L., Fox,A., McClure,J., van't Wout,A.B., Zhao,H., Park,D.R.,
	    Schouten,J.T., Twigg,H.L. I.I.I, Corey,L., Mullins,J.I. and
	    Mittler,J.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-AUG-2009) Microbiology, University of Washington, Box
	    358070, Seattle, WA 98195, USA
FEATURES             Location/Qualifiers
     source	     1..612
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="IS8838_PL_5"
		     /isolation_source="IS8838 plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="5"
		     /country="USA"
		     /collection_date="28-Mar-2002"
		     /note="subtype: B"
     gene	     <1..>612
		     /gene="env"
     CDS	     <1..>612
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ACV88484.1"
		     /db_xref="GI:259014259"
		     /translation="EEEVVIRSANFTDNSKTIIVQLNKSVVINCTRLNNNTRRSITMG
		     PGKAFYATGEIIGDIRQAHCNISKADWNNTLKRVVEKLRRQFKKEKIIFEQSSGGDPE
		     IVMHSFNCGGEFFYCNTTQLFNSTWNWNSTWNGTGELNNTENITLPCRIKQIINMWQG
		     VGRAMYAPPIKGLIRCSSNITGLLLTRDGGHNTSSNDTEIFRPG"
BASE COUNT	246 a	  88 c	  125 g    153 t
ORIGIN
       1 gaagaagagg tagtaattag atctgccaat ttcacagaca atagtaaaac cataatagta 
      61 cagctgaata aatctgtagt aattaattgt acaaggctca acaacaatac aagaaggagt 
     121 ataactatgg gaccaggaaa agcattttat gcaacaggag aaataatagg agatataaga 
     181 caagcacatt gtaacattag taaagcagac tggaataaca ctttaaaacg ggtagttgaa 
     241 aaattaagaa gacaatttaa gaaagaaaaa ataatctttg agcaatcctc aggaggggac 
     301 ccagaaattg taatgcacag ttttaattgt ggaggggaat ttttctactg taatacaaca 
     361 cagctgttta atagtacttg gaattggaat agtacttgga atggtactgg agagttaaat 
     421 aacactgaaa atatcacact cccatgcaga ataaaacaaa ttataaacat gtggcagggg 
     481 gtaggaagag caatgtatgc ccctcccatc aaaggactaa ttagatgttc atcaaatatt 
     541 acagggctac tattaacaag agatggtggt cataatacta gttctaatga tactgagatc 
     601 ttcagacctg ga
//
last modified: Tue May 31 10:56 2022


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