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LOCUS	    GQ443580		    1015 bp    RNA     linear	VRL 22-SEP-2009
DEFINITION  HIV-1 strain CNsd06134 from China pol protein (pol) gene, partial
	    cds
ACCESSION   GQ443580
VERSION     GQ443580.1 GI:258618366
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1015)
            Show all sequences for reference 1
  AUTHORS   Zhang,J., Kang,D., Fu,J., Sun,X., Lin,B., Bi,Z., Nkengasong,J.N.
	    and Yang,C.
  TITLE     Surveillance of transmitted HIV type 1 drug resistance in newly
	    diagnosed hiv type 1-infected patients in Shandong Province, China.
  JOURNAL   AIDS Res. Hum. Retroviruses. 26(1); 99-103 (2010)
  PUBMED    20121622
REFERENCE   2 (bases 1 to 1015)
            Show all sequences for reference 2
  AUTHORS   Zhang,J., Kang,D., Fu,J., Sun,X., Lin,B., Bi,Z., Nkengasong,J. and
	    Yang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-AUG-2009) International Lab Branch, Division of
	    Global AIDS, NCHHSTP, Centers for Disease Control and Prevention,
	    1600 Clifton Road, Mail Stop A-11, Atlanta, GA 30333, USA
FEATURES             Location/Qualifiers
     source	     1..1015
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /strain="CNsd06134"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China: Shandong"
		     /collection_date="2006"
		     /note="group: M"
     gene	     <1..>1015
		     /gene="pol"
     CDS	     <1..>1015
		     /gene="pol"
		     /note="contains protease and reverse transcriptase region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACV83978.1"
		     /db_xref="GI:258618367"
		     /translation="IKIGGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKV
		     RQYDQIXIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIDTVPVTLKPG
		     MDGPKVKQWPLTEEKIKALTEICXEMEEEGKISKIGPENPYNTPVFAIKKKDXTKWRK
		     LVDFRELNKRTQDFWEVQLGIPHPAGLKXKKSVTVLDVGDAYFSVPLDESFRKYTAFT
		     IPSRNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPEMXIYQYMDDLYV
		     GSDLEIGQHRTKIDELRAHLLSWGFTTPDKKHQKEPPFLWMGYELHPDRWTVQPIELP
		     EKDS"
BASE COUNT	394 a	 156 c	  221 g    238 t      6 other
ORIGIN
       1 ataaaaatag gagggcagct gaaagaagct ctattagata caggagcaga tgatacagta 
      61 ttagaagata taaatttgcc aggaaaatgg aaaccaaaaa tgataggggg aattggaggt 
     121 tttatcaaag taaggcaata tgatcagata sttatagaaa tttgtggaaa aaaggctata 
     181 ggtacagtgt tagtaggacc tacacctgtc aacataattg gacgraatat gttgactcag 
     241 attggttgta ctttaaattt tccaattagt cctattgaca ctgtaccagt aacattaaag 
     301 ccaggaatgg atggaccaaa ggttaaacag tggccattga cagaagaaaa aataaaagca 
     361 ttaacagaaa tttgtargga aatggaagag gaaggaaaaa tttcaaaaat tgggcctgaa 
     421 aatccatata atactccagt atttgctata aagaaaaagg acrgcaccaa atggaggaaa 
     481 ttagtagatt tcagagagct caataaaaga actcaggact tttgggaagt acaattagga 
     541 ataccgcatc cagcaggatt aaaaargaaa aaatcagtga cagtactaga tgtgggtgat 
     601 gcatattttt cagtcccttt agatgaaagc tttagaaagt atactgcatt caccatacct 
     661 agtagaaaca atgagacacc aggaatcaga tatcagtaca atgtgctacc acagggatgg 
     721 aaaggatctc cggcaatatt ccagtgtagc atgacaaaaa tcttagagcc ctttagaaaa 
     781 caaaatccag agatggwtat ctatcaatac atggatgact tgtatgtagg atctgattta 
     841 gaaatagggc agcacagaac aaaaatagat gagctaagag ctcatctatt gagctgggga 
     901 tttactacac cagacaaaaa gcatcagaag gaaccgccat ttctttggat gggatatgaa 
     961 ctccatccgg acagatggac agtccagcct atagaactgc cagaaaaaga cagct
//
last modified: Tue May 31 10:56 2022


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