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LOCUS	    GQ256490		     427 bp    RNA     linear	VRL 26-JUL-2009
DEFINITION  HIV-1 clone 3.1-5.1 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   GQ256490
VERSION     GQ256490.1 GI:254548416
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 427)
            Show all sequences for reference 1
  AUTHORS   Brennan,T.P., Woods,J.O., Sedaghat,A.R., Siliciano,J.D.,
	    Siliciano,R.F. and Wilke,C.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUN-2009) Department of Medicine, The Johns Hopkins
	    University School of Medicine, 733 North Broadway BRB 872,
	    Baltimore, MD 21205, USA
REFERENCE   2
            Show all sequences for reference 2
  AUTHORS   Brennan,T.P., Woods,J.O., Sedaghat,A.R., Siliciano,J.D.,
	    Siliciano,R.F. and Wilke,C.O.
  TITLE     Analysis of human immunodeficiency virus type 1 viremia and
	    provirus in resting CD4+ T cells reveals a novel source of residual
	    viremia in patients on antiretroviral therapy
  JOURNAL   J. Virol. 83 (17), 8470-8481 (2009)
  PUBMED    19535437
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Wang,Z., Gurule,E.E., Brennan,T.P., Gerold,J.M., Kwon,K.J.,
	    Hosmane,N.N., Kumar,M.R., Beg,S.A., Capoferri,A.A., Ray,S.C.,
	    Ho,Y.-C., Hill,A.L., Siliciano,J.D. and Siliciano,R.F.
  TITLE     Expanded cellular clones carrying replication-competent HIV-1
	    persist, wax, and wane.
  JOURNAL   Proc. Natl. Acad. Sci. U. S. A.. 115(11); E2575-E2584 (2018)
  PUBMED    29483265
FEATURES             Location/Qualifiers
     source	     1..427
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="182"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="3.1-5.1"
		     /country="USA: Johns Hopkins Hospital, Baltimore,
		     Maryland"
		     /collection_date="Jan-2006"
     gene	     <1..>427
		     /gene="env"
     CDS	     <1..>427
		     /gene="env"
		     /note="C2-V4 region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ACT67024.1"
		     /db_xref="GI:254548417"
		     /translation="QLKEPVEINCTRPNNNTRRSIHIGLGRRFYATRIIGDIRQAHCN
		     LSNIKWNNTLREIAKKLGEKYNKTIVFNGPSGGDPEIVMHTFNCGGEFFYCNATKLFN
		     STWNNSTWNNTNPGENVTITLPCRIKQIINMWQKTGKAMY"
BASE COUNT	180 a	  61 c	   83 g    103 t
ORIGIN
       1 cagctgaagg aacctgtaga aattaattgt acaaggccca acaacaatac aagaaggagt 
      61 atacatatag gactagggag aagattttat gcaacaagaa taataggaga tataagacaa 
     121 gcacattgta accttagtaa tataaaatgg aataacactt taagagagat agctaaaaaa 
     181 ttaggagaaa agtataataa aaccatagtc tttaatggac cctcaggagg ggacccagaa 
     241 attgtaatgc acacttttaa ttgtggagga gaatttttct actgtaatgc aacaaaactg 
     301 tttaattcta cgtggaataa tagtacttgg aataatacta atcctgggga aaatgttacc 
     361 atcacactcc catgcaggat aaaacaaatt ataaacatgt ggcagaaaac aggaaaagca 
     421 atgtatg
//
last modified: Tue May 31 10:56 2022


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