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LOCUS GQ118530 585 bp DNA linear VRL 07-FEB-2011
DEFINITION HIV-1 isolate ABPv1.20 from USA reverse transcriptase (pol) gene,
partial cds
ACCESSION GQ118530
VERSION GQ118530.1 GI:285027898
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 585)
Show all sequences for reference 1
AUTHORS Tazi,L., Imamichi,H., Hirschfeld,S., Metcalf,J.A., Orsega,S.,
Perez-Losada,M., Posada,D., Lane,H.C. and Crandall,K.A.
TITLE HIV-1 infected monozygotic twins: a tale of two outcomes.
JOURNAL BMC Evol Biol. 2011 Mar 8;11:62.
PUBMED 21385447
REFERENCE 2 (bases 1 to 585)
Show all sequences for reference 2
AUTHORS Imamichi,H., Tazi,L., Hirschfeld,S., Metcalf,J.A., Orsega,S.,
Perez-Losada,M., Posada,D., Lane,H.C. and Crandall,K.A.
TITLE Direct Submission
JOURNAL Submitted (06-MAY-2009) Clinical Services Program, SAIC-Frederick,
Inc., P.O. Box B, Bldg.550, Rm.201-A, Frederick, MD 21702, USA
FEATURES Location/Qualifiers
source 1..585
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="ABPv1.20"
/isolation_source="PBMC"
/host="Homo sapiens; male"
/db_xref="taxon:11676"
/country="USA"
/collection_date="1998"
gene <1..>585
/gene="pol"
CDS <1..>585
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="ADC34297.1"
/db_xref="GI:285027899"
/translation="DFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTR
ILEPFRKQNPDIVIYQYVDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKE
PPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKL
IRGTKALTEVIPLTKEAELELAENREILKEPVHGV"
BASE COUNT 228 a 98 c 129 g 130 t
ORIGIN
1 gacttcagga agtatactgc atttacaata cctagtataa acaatgagac accagggatt
61 agatatcagt acaatgtact tccacaggga tggaaaggat caccagcaat attccaaagt
121 agcatgacaa gaatcttaga gccttttagg aaacaaaatc cagacatagt tatctatcaa
181 tatgtggatg atttgtatgt aggatctgac ttagaaatag gacagcatag aacaaaaata
241 gaggaactga gacagcatct gttgaagtgg ggatttacca caccagacaa aaaacatcag
301 aaagaacctc cattcctttg gatgggttat gagctccatc ctgataaatg gacagtacaa
361 cctatagtgc tgccagaaaa ggacagctgg actgtcaatg acatacagaa gttagtggga
421 aaattgaatt gggcaagtca gatttatgca gggattaaag taaggcaatt atgtaaactc
481 attaggggaa ctaaagcact aacagaagta ataccactaa caaaagaagc agaactagaa
541 ctggcagaga acagggagat tctaaaagaa ccagtacatg gagtg
//
last modified: Tue May 31 10:56 2022