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LOCUS	    FJ752417		    1696 bp    RNA     linear	VRL 16-MAR-2009
DEFINITION  HIV-1 isolate GZ0801 from China pol protein (pol) gene, partial cds
ACCESSION   FJ752417
VERSION     FJ752417.1 GI:224830790
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1696)
            Show all sequences for reference 1
  AUTHORS   Han,Z., Leung,T.W.C., Zhao,J., Wang,M., Fan,L., Li,K., Pang,X.,
	    Liang,Z., Lim,W.W.L. and Xu,H.
  TITLE     A HIV-1 heterosexual transmission chain in Guangzhou, China: a
	    molecular epidemiological study.
  JOURNAL   Virol J. 2009 Sep 25;6:148.
  PUBMED    19778458
REFERENCE   2 (bases 1 to 1696)
            Show all sequences for reference 2
  AUTHORS   Han,Z., Leung,T.W.C., Wang,M., Fan,L., Li,K., Pang,X., Liang,Z.,
	    Lim,W., Zhao,J. and Xu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2009) Division for AIDS Control and Prevention,
	    Guangzhou Center for Disease Control and Prevention, Zhongshan San
	    Road 23, Guangzhou, Guangdong 510080, China
FEATURES             Location/Qualifiers
     source	     1..1696
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="GZ0801"
		     /isolation_source="plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="21-Jan-2008"
		     /note="genotype: CRF01_AE"
     gene	     <1..>1696
		     /gene="pol"
     CDS	     <1..>1696
		     /gene="pol"
		     /note="contains protease; gag-pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACN66488.1"
		     /db_xref="GI:224830791"
		     /translation="RRLGDGGGESLCTEAGAERQGTSSSLNFPQITLWQRPLVTVKIG
		     GQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQIQIEICGKKAIGT
		     VLVGPTPVNIIGRNMLTQIGCTLNFPISPIDTVPVTLKPGMDGPKVKQWPLTEEKIKA
		     LTEICKEMEEEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQ
		     LGIPHPAGLKKKKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNETPGIRYQYNVL
		     PQGWKGSPAIFQSSMTKILEPYKIKNPEMVIYQYMDDLYVGSDLEIGQHRIKIEELRA
		     HLLSWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIELPEKDHWTVNDIQKLVGKLN
		     WASQIYPGIKIKQLCKLLRGAKALTDIIPLTEEAELELAENREILKTPVHGVYYDPSK
		     DLVAEVQKQGQDQWTYQIYQEPYKNLKTGKYARKRSAHTNDVRQLAEVVQKIATESIV
		     IWGKTPKFKLPIQRETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKDPIMGAE"
BASE COUNT	667 a	 290 c	  369 g    370 t
ORIGIN
       1 agaagactgg gggatggggg aggagagagc ctctgcactg aagcaggagc agaaagacaa 
      61 ggaacctcct cctccctcaa tttccctcaa atcactcttt ggcaacgacc ccttgtcaca 
     121 gtaaaaatag gaggacagct aaaagaagct ctgttagata caggagcaga tgatacagta 
     181 ttagaagata taaatttgcc aggaaaatgg aaaccaaaaa tgataggggg aattggaggt 
     241 tttatcaaag taaggcaata tgatcagata cagatagaaa tttgtggcaa aaaggctata 
     301 ggtacagtat tagtaggacc tacacctgtc aacataattg gacgaaacat gttgactcag 
     361 attggttgta ctttaaattt cccaattagt cctattgaca ctgtaccagt aacattaaaa 
     421 ccaggaatgg atggaccaaa ggttaaacag tggccattga cagaagaaaa aataaaagca 
     481 ttaacagaaa tttgtaagga gatggaagag gaaggaaaaa tctcaaaaat tgggcctgaa 
     541 aatccataca atactccagt atttgctata aagaaaaagg acagcaccaa atggaggaaa 
     601 ttagtagatt ttagagagct caataaaaga actcaggact tttgggaagt tcaattagga 
     661 ataccacatc cagcaggttt aaaaaagaaa aaatcagtaa cagtactaga tgtgggagat 
     721 gcatattttt cagttccttt agatgagagc tttagaaagt atactgcatt caccatacct 
     781 agtataaaca atgagacacc aggaatcaga tatcagtaca atgtgctgcc acagggatgg 
     841 aaaggatcac cagcaatatt ccagagtagc atgacaaaaa tcttagagcc ctataaaata 
     901 aaaaatccag aaatggttat ctatcaatac atggatgact tgtatgtagg atctgattta 
     961 gaaatagggc aacacagaat aaaaatagag gagctaagag cccatctgtt gagctgggga 
    1021 tttactacac cagacaaaaa gcatcagaag gaacctccat tcctttggat gggatatgaa 
    1081 ctccatcctg acaaatggac agtccagcct atagaactgc cagaaaaaga ccactggact 
    1141 gtcaatgata tacagaagtt agtgggaaaa ctaaattggg caagccaaat ttatccagga 
    1201 attaagataa agcaactgtg taaactcctc aggggagcta aagcactaac agacataata 
    1261 ccactgactg aagaagcaga attagagttg gcagagaaca gggaaattct aaaaactcca 
    1321 gtgcatggag tatattatga cccatcaaaa gacttagtag cagaagtaca aaaacaaggg 
    1381 caggaccaat ggacatatca aatatatcaa gagccatata aaaatctaaa gacaggaaag 
    1441 tatgccagaa aaaggtctgc tcacactaat gatgtaagac aattggcaga agtggtgcaa 
    1501 aaaatagcca cagaaagcat agtaatatgg ggaaagaccc ctaaatttaa actacccata 
    1561 caaagagaaa catgggaaac atggtggacg gagtattggc aggctacctg gattcctgaa 
    1621 tgggaatttg ttaatactcc tcctctagta aaattgtggt accaattaga aaaagacccc 
    1681 ataatgggag cagaga
//
last modified: Tue May 31 10:56 2022


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