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LOCUS	    FJ530650		     761 bp    DNA     linear	VRL 01-FEB-2009
DEFINITION  HIV-1 isolate in105rt from India reverse transcriptase (pol) gene,
	    partial cds
ACCESSION   FJ530650
VERSION     FJ530650.1 GI:221858345
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 761)
            Show all sequences for reference 1
  AUTHORS   Deshpande,A., Jauvin,V., Pinson,P., Jeannot,A.C. and Fleury,H.J.
  TITLE     Phylogenetic analysis of HIV-1 reverse transcriptase sequences from
	    382 patients recruited in JJ Hospital of Mumbai, India, between
	    2002 and 2008.
  JOURNAL   AIDS Res. Hum. Retroviruses. 25(6); 633-5 (2009)
  PUBMED    19534630
REFERENCE   2 (bases 1 to 761)
            Show all sequences for reference 2
  AUTHORS   Fleury,H.J., Jauvin,V., Pinson,P., Jeannot,A.C. and Deshpande,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2008) Universite Bordeaux 2, Laboratoire de
	    Virologie EA2968, 146 rue Leo Saignat, Bordeaux 33076, France
FEATURES             Location/Qualifiers
     source	     1..761
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="in105rt"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="India"
		     /collection_date="2003"
     gene	     <1..>761
		     /gene="pol"
     CDS	     <1..>761
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="reverse transcriptase"
		     /protein_id="ACM41123.1"
		     /db_xref="GI:221858346"
		     /translation="PISPIETIPVKLKPGMDGPKVKQWPLTEEKIKALTEICDEMEKE
		     GKIXKIGPENPYNTPXFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKX
		     KKSVTVLDVGDAYFSVPLXEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIF
		     QXXMXKILEPFRXRNPGIVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPD
		     KKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTV"
BASE COUNT	293 a	 127 c	  159 g    171 t     11 other
ORIGIN
       1 cccattagtc ctattgaaac tataccagta aaattaaagc caggaatgga tggcccaaag 
      61 gttaaacaat ggccattgac agaagagaaa ataaaagcat tgacagaaat ttgtgatgaa 
     121 atggagaagg aaggaaaaat twcaaaaatt gggcctgaaa atccatataa cactccarta 
     181 tttgccataa aaaagaagga cagtactaag tggagaaaat tagtagattt cagggaactc 
     241 aataaaagaa ctcaagattt ttgggaagtt caattaggaa taccacaccc agcagggtta 
     301 aaamagaaaa aatcagtgac agtactggat gtgggggatg catatttttc agttccttta 
     361 yatgaagact tcaggaagta tactgcattc accataccta gtacaaacaa tgaaacacca 
     421 gggattaggt atcaatataa tgtgctwcca cagggatgga aaggatcacc agcaatattc 
     481 cagkgtasca tgayaaaaat cttagagccc tttaggrcac gaaatccagg aatagtcatc 
     541 tatcaatata tggatgactt gtatgtwgga tctgacttag aaatagggca acatagagca 
     601 aaaatagarg agttaagaga acatctgtta aagtggggat ttaccacacc agacaagaaa 
     661 catcagaaag aacccccatt tctttggatg gggtatgaac tccatcctga caaatggaca 
     721 gtacagccta tacagctgcc agaaaaggat agctggactg t
//
last modified: Tue May 31 10:56 2022


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