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LOCUS FJ530650 761 bp DNA linear VRL 01-FEB-2009
DEFINITION HIV-1 isolate in105rt from India reverse transcriptase (pol) gene,
partial cds
ACCESSION FJ530650
VERSION FJ530650.1 GI:221858345
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 761)
Show all sequences for reference 1
AUTHORS Deshpande,A., Jauvin,V., Pinson,P., Jeannot,A.C. and Fleury,H.J.
TITLE Phylogenetic analysis of HIV-1 reverse transcriptase sequences from
382 patients recruited in JJ Hospital of Mumbai, India, between
2002 and 2008.
JOURNAL AIDS Res. Hum. Retroviruses. 25(6); 633-5 (2009)
PUBMED 19534630
REFERENCE 2 (bases 1 to 761)
Show all sequences for reference 2
AUTHORS Fleury,H.J., Jauvin,V., Pinson,P., Jeannot,A.C. and Deshpande,A.
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2008) Universite Bordeaux 2, Laboratoire de
Virologie EA2968, 146 rue Leo Saignat, Bordeaux 33076, France
FEATURES Location/Qualifiers
source 1..761
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="in105rt"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="India"
/collection_date="2003"
gene <1..>761
/gene="pol"
CDS <1..>761
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="reverse transcriptase"
/protein_id="ACM41123.1"
/db_xref="GI:221858346"
/translation="PISPIETIPVKLKPGMDGPKVKQWPLTEEKIKALTEICDEMEKE
GKIXKIGPENPYNTPXFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKX
KKSVTVLDVGDAYFSVPLXEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIF
QXXMXKILEPFRXRNPGIVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPD
KKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTV"
BASE COUNT 293 a 127 c 159 g 171 t 11 other
ORIGIN
1 cccattagtc ctattgaaac tataccagta aaattaaagc caggaatgga tggcccaaag
61 gttaaacaat ggccattgac agaagagaaa ataaaagcat tgacagaaat ttgtgatgaa
121 atggagaagg aaggaaaaat twcaaaaatt gggcctgaaa atccatataa cactccarta
181 tttgccataa aaaagaagga cagtactaag tggagaaaat tagtagattt cagggaactc
241 aataaaagaa ctcaagattt ttgggaagtt caattaggaa taccacaccc agcagggtta
301 aaamagaaaa aatcagtgac agtactggat gtgggggatg catatttttc agttccttta
361 yatgaagact tcaggaagta tactgcattc accataccta gtacaaacaa tgaaacacca
421 gggattaggt atcaatataa tgtgctwcca cagggatgga aaggatcacc agcaatattc
481 cagkgtasca tgayaaaaat cttagagccc tttaggrcac gaaatccagg aatagtcatc
541 tatcaatata tggatgactt gtatgtwgga tctgacttag aaatagggca acatagagca
601 aaaatagarg agttaagaga acatctgtta aagtggggat ttaccacacc agacaagaaa
661 catcagaaag aacccccatt tctttggatg gggtatgaac tccatcctga caaatggaca
721 gtacagccta tacagctgcc agaaaaggat agctggactg t
//
last modified: Tue May 31 10:56 2022