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LOCUS FJ441983 897 bp DNA linear VRL 28-APR-2009
DEFINITION HIV-2 isolate 1-14 from United Kingdom integrase (pol) gene,
partial cds
ACCESSION FJ441983
VERSION FJ441983.1 GI:227430599
KEYWORDS .
SOURCE Human immunodeficiency virus 2 (HIV-2)
ORGANISM Human immunodeficiency virus 2 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 897)
Show all sequences for reference 1
AUTHORS Xu,L., Anderson,J., Garrett,N., Ferns,B., Wildfire,A., Cook,P.,
Workman,J., Graham,S. and Smit,E.
TITLE Dynamics of raltegravir resistance profile in an HIV type
2-infected patient.
JOURNAL AIDS Res. Hum. Retroviruses. 25(8); 843-7 (2009)
PUBMED 19618998
REFERENCE 2 (bases 1 to 897)
Show all sequences for reference 2
AUTHORS Xu,L., Anderson,J., Garrett,N. and Smit,E.
TITLE Direct Submission
JOURNAL Submitted (06-NOV-2008) Health Protection Agency, Heart of England
NHS Foundation Trust, Birmingham B9 5SS, U.K.
FEATURES Location/Qualifiers
source 1..897
/organism="Human immunodeficiency virus 2"
/proviral="Human immunodeficiency virus 2"
/mol_type="genomic DNA"
/isolate="1-14"
/host="Homo sapiens"
/db_xref="taxon:11709"
/country="United Kingdom"
/collection_date="15-Dec-2006"
gene <1..>897
/gene="pol"
CDS <1..>897
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="integrase"
/protein_id="ACP28287.1"
/db_xref="GI:227430600"
/translation="FLEKIEPAQEEHGKYHGNVKELVHKFGIPQLVAKQIVNSCDKCQ
QKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQETGRQTALFLL
KLASRWPITHLHTDNGANFTSQDVKMVAWWVGIEQTFGVPYNPQSQGVVEAMNHHLKN
QIDRLRDQAVSIETVVLMATHCMNFKRRGGIGDMTPAERLVNMITTEQEIQFLQAKNL
KFKTFQVYYREGRDQLWKGPGELLWKGEGAVIIKVGTEIKVVPRRKAKIIRHYGGGKE
LDCSADMEDTRQVGEVAQSDQVP"
BASE COUNT 344 a 160 c 217 g 176 t
ORIGIN
1 ttcttagaaa agatagaacc agcacaggaa gagcatggaa aatatcatgg caatgtaaaa
61 gaactagtcc ataaatttgg aatcccacaa ttagtggcaa aacagatagt aaattcctgt
121 gataaatgcc aacaaaaagg ggaagctatt catggacagg taaatgcaga actaggaaca
181 tggcagatgg actgtacaca tttagaagga aagattataa tagtggcagt ccatgtagcc
241 agtgggttta tagaagcaga agtaataccc caggaaacag gaagacagac agctctcttc
301 ctgttaaaac tggccagcag atggcctatc acacacctgc acacagacaa cggtgccaac
361 ttcacctcac aagatgtgaa gatggtagcc tggtgggtag gaatagagca aacctttgga
421 gtaccctata acccacaaag tcaaggagta gtggaagcaa tgaaccatca tctaaaaaat
481 caaatagaca gactcagaga tcaagcagta tcaatagaga cagttgtact aatggcaact
541 cactgcatga attttaaaag aaggggagga ataggggata tgacccctgc agaaagacta
601 gttaacatga taaccacaga gcaagaaata cagttcctcc aagcaaaaaa tttaaaattc
661 aaaactttcc aggtctatta ccgagaaggc agagatcaac tctggaaggg acctggtgaa
721 ctattgtgga aaggggaagg agcagtcatc ataaaggtag ggacagaaat caaagtagta
781 cccaggagaa aagcaaaaat tataaggcac tatggaggag gaaaagaatt ggattgtagt
841 gccgacatgg aggataccag gcaggttgga gaggtggcac agtctgatca agtacct
//
last modified: Tue May 31 10:56 2022