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LOCUS	    FJ430378		     621 bp    DNA     linear	VRL 16-DEC-2008
DEFINITION  HIV-1 isolate ES8provirus10 from USA nef protein (nef) gene,
	    complete cds
ACCESSION   FJ430378
VERSION     FJ430378.1 GI:217323032
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 621)
            Show all sequences for reference 1
  AUTHORS   Bailey,J.R., Brennan,T.P., O'Connell,K.A., Siliciano,R.F. and
	    Blankson,J.N.
  TITLE     Evidence of CD8+ T-cell-mediated selective pressure on human
	    immunodeficiency virus type 1 nef in HLA-B*57+ elite suppressors.
  JOURNAL   J. Virol.. 83(1); 88-97 (2009)
  PUBMED    18945771
REFERENCE   2 (bases 1 to 621)
            Show all sequences for reference 2
  AUTHORS   Blankson,J.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2008) Medicine, Johns Hopkins University School
	    of Medicine, 733 N Broadway, Baltimore, MD 21205, USA
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Salgado,M., Brennan,T.P., O'Conell,K.A., Bailey,J.R., Ray,S.C.,
	    Siliciano,R.F. and Blankson,J.N.
  TITLE     Evolution of the HIV-1 nef gene in HLA-B*57 Positive Elite
	    Suppressors
  JOURNAL   Retrovirology 7 (1), 94 (2010)
  PUBMED    21059238
FEATURES             Location/Qualifiers
     source	     1..621
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="ES8provirus10"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="collected 2004-2005"
     gene	     1..621
		     /gene="nef"
     CDS	     1..621
		     /gene="nef"
		     /codon_start="1"
		     /transl_table="1"
		     /product="nef protein"
		     /protein_id="ACK37926.1"
		     /db_xref="GI:217323033"
		     /translation="MGNKWSKSKLGGWFTVRERMRRTEPAADGMGPASRDLERHGALT
		     SSNTAATNADCAWLEAQEEEEVGFPIRPQVPLRPMTYKSALDLSHFLKEKGGLEGLIY
		     SQKRQEILDLWVYHTQGFFPDWQNYTPGPGTRYPLTFGWCFKLVPVDPEKVEEANEGE
		     NNCLLHPMSQHGMDDPEKEVLVWRFDSRLAFHHLARELHPEFYKDC"
BASE COUNT	193 a	 132 c	  170 g    126 t
ORIGIN
       1 atgggtaata agtggtcaaa aagtaagctg gggggatggt tcactgtaag ggaaagaatg 
      61 agaagaactg aaccagcagc agatgggatg ggaccagcat ctcgggacct agaaagacat 
     121 ggagcactca caagtagcaa tacagcagct accaatgctg attgtgcctg gctagaagca 
     181 caagaggagg aggaggtggg ttttccaatc agacctcagg tacctttaag accaatgact 
     241 tataagtcag ctctggatct tagccacttt ttaaaagaaa aggggggact ggaagggcta 
     301 atttattccc agaaaagaca agagatcctt gatctgtggg tctaccacac acaaggcttc 
     361 ttccctgact ggcagaacta cacaccaggg ccagggacca gatatcccct gaccttcgga 
     421 tggtgcttca agctagtacc agttgatcca gagaaagtag aagaagccaa tgaaggagag 
     481 aacaactgct tgttacaccc tatgagccag catgggatgg atgacccaga gaaagaagtg 
     541 ctagtatgga ggtttgacag ccgcctagca tttcatcact tggcccgaga gctgcatccg 
     601 gagttctaca aggactgctg a
//
last modified: Tue May 31 10:56 2022


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