View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS FJ375064 1283 bp DNA linear VRL 11-MAY-2009
DEFINITION HIV-1 isolate 05HBsz.860 from China pol protein (pol) gene, partial
cds
ACCESSION FJ375064
VERSION FJ375064.1 GI:229554115
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1283)
Show all sequences for reference 1
AUTHORS Luo,M., Liu,H., Zhuang,K., Liu,L., Su,B., Yang,R., Tien,P.,
Zhang,L., Gui,X. and Chen,Z.
TITLE Prevalence of drug-resistant HIV-1 in rural areas of Hubei province
in the People's Republic of China
JOURNAL J. Acquir. Immune Defic. Syndr. 50 (1), 1-8 (2009)
PUBMED 19295329
REFERENCE 2 (bases 1 to 1283)
Show all sequences for reference 2
AUTHORS Chen,Z., Luo,M., Liu,H., Zhuang,K., Liu,L., Yang,R., Tien,P.,
Zhang,L. and Gui,X.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2008) The University of Hong Kong Li Ka Shing
Faculty of Medicine, AIDS Institute, 21 Sassoon Road, Pokfulam,
Hong Kong SAR, P.R. China
FEATURES Location/Qualifiers
source 1..1283
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="05HBsz.860"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="China"
/collection_date="2005"
gene <1..>1283
/gene="pol"
CDS <1..>1283
/gene="pol"
/codon_start="3"
/transl_table="1"
/product="pol protein"
/protein_id="ACQ76514.1"
/db_xref="GI:229554116"
/translation="RPLVTIKIGGQLKEALLDTGADDTVLEDMNLPGRWKPKMIGGIG
GLIKVRQYDQIPIEICGHKAVGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPV
KLKPGMDGPKVKQWPLTEEKIRALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDS
TKWRKLVDFRELNKGTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRK
YTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPDIVIYQYM
DDLYVGSDLEIGQHRTKIEELRQHLLGWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQ
PIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRELCKLIRGTKALTEVVPLTEAAE
LELAENREILKEPVHGVYYDPSKELIAEIQKQGLG"
BASE COUNT 494 a 212 c 290 g 287 t
ORIGIN
1 aacgacccct cgtcacaata aagatagggg ggcaattaaa agaagctcta ttagatacag
61 gagcagatga tacagtatta gaagacatga atttgccagg aagatggaaa ccaaaaatga
121 tagggggaat tggaggtctt atcaaagtaa gacagtatga tcagataccc atagaaattt
181 gcggacacaa ggccgtaggt acagtattaa taggacctac acctgtcaac ataattggaa
241 gaaatctgtt gactcagatt ggttgcactt taaattttcc cattagtcct attgaaactg
301 taccagtaaa attaaagcca ggaatggatg gcccaaaagt taaacagtgg ccattgacag
361 aagaaaaaat aagagcatta gtagaaattt gtacagaaat ggaaaaggaa ggaaaaattt
421 caaaaatcgg gcctgaaaat ccatacaata ctccagtatt tgccataaag aaaaaagaca
481 gtactaaatg gagaaaatta gtagatttca gggaactgaa taaaggaact caagacttct
541 gggaagttca attaggaata ccacatcccg cagggttaaa aaagaaaaaa tctgtaacag
601 tcctggatgt gggtgatgca tatttctcag ttcccttaga tgaagacttc aggaagtata
661 ctgcatttac catacctagt gtaaacaatg agacaccagg aatcaggtat cagtacaatg
721 tgctcccaca gggatggaaa gggtcaccag caatattcca atgtagtatg acaaaaatct
781 tagagccttt tagaaaacaa aatccagaca tagttatcta tcaatacatg gatgatttgt
841 atgtaggatc tgacttagaa atagggcagc atagaacaaa aatagaggaa ctgagacaac
901 atctgttggg gtgggggttt accacaccag acaaaaaaca tcagaaagaa cctccattcc
961 tttggatggg ttatgaactc catcctgata aatggacagt acagcctata gtgctgccag
1021 aaaaggacag ctggactgtc aatgacatac agaagttagt gggaaagttg aattgggcaa
1081 gtcagattta tgcagggatt aaggtaaggg aattatgtaa actcattagg ggaaccaagg
1141 cactaacaga agtagtacca ctaacagagg cagcagagct agaactggca gaaaacaggg
1201 aaattctgaa agaaccagta catggagtgt attatgaccc atcaaaagaa ttaatagcag
1261 aaatacagaa gcaggggcta ggc
//
last modified: Tue May 31 10:56 2022