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LOCUS	    FJ185950		     852 bp    DNA     linear	VRL 17-MAR-2009
DEFINITION  HIV-1 isolate ZM214M_SGA_A4 from Zambia envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   FJ185950
VERSION     FJ185950.1 GI:224939441
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 852)
            Show all sequences for reference 1
  AUTHORS   Haaland,R.E., Hawkins,P.A., Salazar-Gonzalez,J., Johnson,A.,
	    Tichacek,A., Karita,E., Manigart,O., Mulenga,J., Keele,B.F.,
	    Shaw,G.M., Hahn,B.H., Allen,S.A., Derdeyn,C.A. and Hunter,E.
  TITLE     Inflammatory genital infections mitigate a severe genetic
	    bottleneck in heterosexual transmission of subtype A and C HIV-1
  JOURNAL   PLoS Pathog. 5 (1), E1000274 (2009)
  PUBMED    19165325
REFERENCE   2 (bases 1 to 852)
            Show all sequences for reference 2
  AUTHORS   Haaland,R.E., Hawkins,P.A., Salazar-Gonzalez,J., Johnson,A.T.,
	    Tichacek,A., Karita,E., Manigart,O., Mulenga,J., Keele,B.F.,
	    Shaw,G.M., Hahn,B.H., Allen,S., Derdeyn,C.A. and Hunter,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2008) Pathology and Laboratory Medicine, Emory
	    University, 954 Gatewood Rd NE, Atlanta, GA 30329, USA
FEATURES             Location/Qualifiers
     source	     1..852
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="ZM214M_SGA_A4"
		     /db_xref="taxon:11676"
		     /country="Zambia"
		     /collection_date="02-Jul-2003"
		     /note="subtype: C"
     gene	     <1..>852
		     /gene="env"
     CDS	     <1..>852
		     /gene="env"
		     /note="V1-V4 region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ACN70139.1"
		     /db_xref="GI:224939442"
		     /translation="CSNVDINETSINFNITSNISMKEEMKNCSFKVNSELRDKNRREH
		     ALFYKLDIVQLNDEGNDSYSYRLINCNTSTIKQACPKVSFEPIPIHYCAPAGYAILKC
		     NNETFNGSGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIMIRSENLTNNAKTIIV
		     QLTEAVNITCMRPGNNTRRSVRIGPGQTFYATGEIIGDIRQAHCNISKDKWNQILQNV
		     SAKLGEHFHGKTIKFEPSSGGDLEITTHSFNCGGEFFYCNTTNLFSRTYTNGSNSNIT
		     SATITLPC"
BASE COUNT	337 a	 145 c	  154 g    216 t
ORIGIN
       1 tgtagcaatg ttgatattaa tgagacctcc attaatttta atattacctc caatatttcc 
      61 atgaaggaag agatgaaaaa ctgctctttc aaggtaaact cagaactaag agataaaaac 
     121 aggagagaac atgcattgtt ttataaactt gatatagtac aacttaatga tgaggggaat 
     181 gacagctaca gctatagatt aataaattgt aatacctcaa ccataaaaca ggcctgtcca 
     241 aaggtctctt ttgaaccaat tcctatacat tattgtgctc cagctggtta tgcgattcta 
     301 aagtgtaata atgagacatt caatggatca gggccatgca ataatgtcag cacagtacaa 
     361 tgtacacatg gaattaagcc agtggtatca actcaactac tgttgaatgg tagtctagca 
     421 gaaaaagaaa taatgattag atctgaaaat ctgacaaaca atgccaaaac aataatagta 
     481 caacttacag aagctgtaaa cattacgtgt atgaggcccg gcaataatac aagaagaagt 
     541 gtaagaatag ggccaggaca gacattctat gcaacaggag aaataatagg agatataaga 
     601 caagcacatt gtaacattag taaagataaa tggaaccaaa ttttacaaaa tgtaagcgca 
     661 aagttaggag aacacttcca tggtaaaaca ataaaatttg aaccatcctc aggaggggac 
     721 ctagaaatta caacacatag ttttaattgt ggaggagaat ttttctattg caatacaaca 
     781 aacctgttta gtagaaccta cacgaatgga agtaattcaa atatcacaag tgcaaccatc 
     841 accctcccat gc
//
last modified: Tue May 31 10:56 2022


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