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LOCUS	    EU908767		     839 bp    RNA     linear	VRL 23-SEP-2008
DEFINITION  HIV-1 isolate pt7w8 from Italy integrase (pol) gene, partial cds
ACCESSION   EU908767
VERSION     EU908767.1 GI:204304619
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 839)
            Show all sequences for reference 1
  AUTHORS   Canducci,F., Sampaolo,M., Marinozzi,M.C., Boeri,E., Spagnuolo,V.,
	    Galli,A., Castagna,A., Lazzarin,A., Clementi,M. and Gianotti,N.
  TITLE     Dynamic patterns of human immunodeficiency virus type 1 integrase
	    gene evolution in patients failing raltegravir-based salvage
	    therapies.
  JOURNAL   AIDS. 23(4); 455-60 (2009)
  PUBMED    19165083
REFERENCE   2 (bases 1 to 839)
            Show all sequences for reference 2
  AUTHORS   Canducci,F., Sampaolo,M., Marinozzi,M.C., Boeri,E. and Clementi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUL-2008) Laboratory of Microbiology and Virology,
	    University Vita-salute San Raffaele, via Olgettina 58, Milan 20132,
	    Italy
FEATURES             Location/Qualifiers
     source	     1..839
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="pt7w8"
		     /db_xref="taxon:11676"
		     /country="Italy"
		     /collection_date="Dec-2007"
     gene	     <1..>839
		     /gene="pol"
     CDS	     <1..>839
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="integrase"
		     /protein_id="ACH99156.1"
		     /db_xref="GI:204304620"
		     /translation="VDKLVSNGIRKVLFLDGIDKAQEEHEKYHSNWRAMAADFNLPPV
		     VAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVI
		     PAETGQETAYFILKLAGRWPVKTIHTDNGSNFTSTAVKAACWWAGVKQEFGIPYNPQS
		     QGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVLIHNFKRKGGIGGYSAGERIVDIIA
		     SDIQTKELQKQITKIQNFRVYYRENRDPLWKGPAKLLWKGEGAVVIQDNSXIKVVPRR
		     KAK"
BASE COUNT	329 a	 126 c	  203 g    177 t      4 other
ORIGIN
       1 gtagataaat tagtcagtaa tggaatyagg aaagtactat ttttagatgg aatagataaa 
      61 gcccaagaag aacatgagaa atatcacagt aattggagag caatggctgc tgattttaac 
     121 ctgccaccgg tagtagcaaa agaaatagta gccagctgtg ataaatgtca gctaaaagga 
     181 gaagctatgc atggacaagt ggactgtagt ccaggaatat ggcaattgga ttgtacacat 
     241 ttagaaggaa aaatcatcct ggtagcagty catgtagcca gtggatatat agaagcagaa 
     301 gttatcccag cagaracagg gcaggaaaca gcatacttta tcttaaaatt agcaggaaga 
     361 tggccagtaa aaacaataca tacagacaat ggcagcaatt tcaccagtac tgcggttaag 
     421 gccgcctgtt ggtgggcggg ggtcaagcaa gaatttggca ttccctacaa tccccaaagt 
     481 caaggagtag tagaatctat gaataaagaa ttaaagaaaa ttataggaca ggtaagagat 
     541 caggctgaac atcttaagac agcagtacaa atggcagtac tcattcacaa ttttaagaga 
     601 aaagggggga ttggggggta cagtgcaggg gaaagaatag tagacataat agcatcagac 
     661 atacaaacta aagaactaca gaaacaaatt acaaaaattc aaaattttcg ggtttattac 
     721 agggagaaca gagatccact ttggaaagga ccagcaaagc tcctctggaa aggtgaaggg 
     781 gcagtagtaa tacaggataa tagtgamata aaagtagtgc caagaagaaa agcaaaaat
//
last modified: Tue May 31 10:56 2022


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