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LOCUS EU618083 908 bp RNA linear VRL 29-JAN-2009
DEFINITION HIV-1 isolate 132-4 from Cameroon pol protein (pol) gene, partial
cds
ACCESSION EU618083
VERSION EU618083.1 GI:194273744
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 908)
Show all sequences for reference 1
AUTHORS Brennan,C.A., Bodelle,P., Coffey,R., Devare,S.G., Golden,A.,
Hackett,J.J., Harris,B., Holzmayer,V., Luk,K.-C., Schochetman,G.,
Swanson,P., Yamaguchi,J., Vallari,A., Ndembi,N., Ngansop,C.,
Makamche,F., Mbanya,D., Gurtler,L.G., Zekeng,L. and Kaptue,L.
TITLE The prevalence of diverse HIV-1 strains was stable in Cameroonian
blood donors from 1996 to 2004.
JOURNAL J. Acquir. Immune Defic. Syndr.. 49(4); 432-9 (2008)
PUBMED 18931623
REFERENCE 2 (bases 1 to 908)
Show all sequences for reference 2
AUTHORS Brennan,C.
TITLE Direct Submission
JOURNAL Submitted (03-APR-2008) 09NG, Abbott Diagnostics, 100 Abbott Park
Rd, Abbott Park, IL 60064-6015, USA
COMMENT Subtype assigned by HIV database using RIP [JM 1/11].
FEATURES Location/Qualifiers
source 1..908
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="132-4"
/isolation_source="plasma"
/db_xref="taxon:11676"
/country="Cameroon"
/note="collected in 2003-2004"
gene <1..>908
/gene="pol"
CDS <1..>908
/gene="pol"
/codon_start="3"
/transl_table="1"
/product="pol protein"
/protein_id="ACF37542.1"
/db_xref="GI:194273745"
/translation="QVDKLVSSGVRKVLFLDGIDKAQEEHERYHSNWRAMASDFNLPP
IVAKEIVASCDKCQLKGEAIHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEV
IPAETGQETAYFILKLAGRWPVKVIHTDNGSNFTSAAVKAACWWANXTQEFGIPYNPQ
SQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDII
ASDIQTKELQKQITKIQNFRVYYRDSRDPIWKGPAKLLWKGEGAVVIQDNSDIKVVPR
RKVKIIKDYGKQMAGDDCVAGRQNEN"
BASE COUNT 362 a 134 c 217 g 193 t 2 other
ORIGIN
1 aacaagtaga taaattagtc agtagtggag tcaggaaggt actattttta gatggcatag
61 ataaagccca agaagaacat gaaagatatc acagcaactg gagagcaatg gctagtgatt
121 ttaatctgcc acctatagta gcaaaagaaa tagtggccag ctgtgataaa tgtcagctaa
181 aaggggaagc catacatgga caagtagact gtagtccagg aatatggcaa ttagattgta
241 cacatttaga aggaaaaatt atcctggtag cagtccatgt agccagtggc tatatagaag
301 cagaagttat cccrgcagaa acaggacaag agacagcata ctttatatta aaattagcag
361 gaagatggcc agtgaaagta atacacacag acaatggtag caatttcacc agtgctgcag
421 taaaggcagc atgttggtgg gcaaatrtca cacaagaatt tggaattccc tacaatcccc
481 aaagccaagg agtagtagaa tctatgaata aagaattaaa gaaaattata gggcaggtca
541 gggatcaagc tgaacacctt aagacagcag tacagatggc agtattcatt cacaatttta
601 aaagaaaagg ggggattggg gggtacagtg caggagaaag aataatagac ataatagcat
661 cagatataca aactaaagaa ctacaaaaac agattacaaa aattcaaaat tttcgggttt
721 attacaggga cagcagagac cccatttgga aaggaccagc aaagctactt tggaaaggtg
781 aaggggcagt agtaatacag gacaacagtg atataaaagt agtaccaaga agaaaagtaa
841 aaatcattaa ggattatgga aaacagatgg caggtgatga ttgtgtggca ggtagacaga
901 atgagaat
//
last modified: Tue May 31 10:56 2022