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LOCUS EU529853 1302 bp DNA linear VRL 31-MAR-2008
DEFINITION HIV-1 isolate 07SP95-384466 from Spain pol protein (pol) gene,
partial cds
ACCESSION EU529853
VERSION EU529853.1 GI:169793760
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1302)
Show all sequences for reference 1
AUTHORS Yebra,G., Rivas,P., Herrero,M.D., Lopez,M., De Mulder,M.,
Puente,S., Ramirez-Olivencia,G., Soriano,V. and Holguin,A.
TITLE Clinical differences and viral diversity between newly HIV type
1-diagnosed African and non-African patients in Spain (2005-2007).
JOURNAL AIDS Res. Hum. Retroviruses. 25(1); 37-44 (2009)
PUBMED 19182919
REFERENCE 2 (bases 1 to 1302)
Show all sequences for reference 2
AUTHORS Holguin,A. Sr.., Yebra,G. and De Mulder,M.
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2008) Infectious Diseases, Hospital Carlos III,
Sinesio Delgado St. 10, Madrid 28029, Spain
REFERENCE 3
Show all sequences for reference 3
AUTHORS Yebra,G., Delgado,R., Pulido,F., Rubio,R., Galan,J.C., Moreno,S.
and Holguin,A.
TITLE Different trends of transmitted HIV-1 drug resistance in Madrid,
Spain, among risk groups in the last decade.
JOURNAL Arch. Virol.. 159(5); 1079-87 (2014)
PUBMED 24297490
FEATURES Location/Qualifiers
source 1..1302
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="07SP95-384466"
/isolation_source="plasma"
/db_xref="taxon:11676"
/country="Spain"
/note="subject originally from Paraguay subtype:
recombinant CRF31_BC"
gene <1..>1302
/gene="pol"
CDS <1..>1302
/gene="pol"
/note="contains PR and RT"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACA81423.1"
/db_xref="GI:169793761"
/translation="PQITLWQRPLVTIKVEGQLREALLDTGADDTVLEEIKLSGPWKP
KMIGGIGGFIKVRQYDQIPIEICGKKAIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTXMEKEGKITKIGPENPYNTPIF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDEDFRKYTAFTIPSTNNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIQLPXKDSWTVNDIQKLVGKLNWASQIYPGIKVXQLCKLLRGAKALTDIV
PLTEEAELELXENREILKEPVHGXYYDPSKDLVAEIQKQGQD"
BASE COUNT 515 a 221 c 275 g 282 t 9 other
ORIGIN
1 cctcaratca ctctttggca rcgacccctt gtcacaataa aagtagaggg gcaactaagg
61 gaggctctct tagacacagg agcagatgat acagtattag aagaaataaa attgtcagga
121 ccttggaaac caaaaatgat aggaggaatt gggggtttta tcaaagtaag acagtatgat
181 caaataccta tagaaatttg tggaaaaaag gctataggta cagtactagt aggacctaca
241 cctgtcaaca taattggaag aaacctgttg actcaacttg gatgcacact aaattttcca
301 attagtccca ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtt
361 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tactgahatg
421 gagaaggaag gaaaaattac aaaaattggg cctgaaaatc catataacac cccaatattt
481 gccataaaaa agaaggacag tactaagtgg agaaaattag tagatttcag ggaactcaat
541 aaaagaaccc aagatttttg ggaagttcaa ttagggatac cacacccagc agggttaaaa
601 aagaaaaagt cagtgacagt actggatgtg ggggatgcat atttttcagt acctttagat
661 gaagacttta ggaaatacac tgcattcacc ataccaagta caaacaatga aacaccaggg
721 gttagatatc agtacaatgt gctaccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa tagggcaaca tagaacaaaa
901 atagaggaac tgagacaaca tctgttgaag tggggattca ctacaccaga taagaaacat
961 cagaaagaac ccccatttct ttggatgggg tatgaactcc atcctgacaa atggacagta
1021 cagcctatac agctgccarh aaaggatagc tggactgtca atgatataca gaagttagtg
1081 ggaaaattaa actgggcaag tcagatttac ccaggaataa aagtaaraca aytgtgcaaa
1141 ctccttaggg gagccaaagc actaacagac atagtaccac tgactgaaga agcagaatta
1201 gaattggmag agaacaggga aattctaaaa gaaccagtac atggagyata ttatgaccca
1261 tcaaaagact tagtagctga aatacagaaa caagggcagg ac
//
last modified: Tue May 31 10:56 2022