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LOCUS EU362926 1302 bp RNA linear VRL 13-FEB-2008
DEFINITION HIV-1 isolate 07SP72-400288 pol protein (pol) gene, partial cds
ACCESSION EU362926
VERSION EU362926.1 GI:167473186
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1302)
Show all sequences for reference 1
AUTHORS Holguin Fernandez,A., Yebra,G. and Mulder,M.
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2007) Infectious Diseases, Hospital Carlos III,
Sinesio Delgado 10, Madrid 28029, Spain
REFERENCE 2
Show all sequences for reference 2
AUTHORS Holguin,A., De Mulder,M., Yebra,G., Lopez,M. and Soriano,V.
TITLE Increase of non-B subtypes and recombinants among newly diagnosed
HIV-1 native Spaniards and immigrants in Spain.
JOURNAL Curr. HIV. Res.. 6(4); 327-34 (2008)
PUBMED 18691031
REFERENCE 3
Show all sequences for reference 3
AUTHORS Yebra,G., Rivas,P., Herrero,M.D., Lopez,M., De Mulder,M.,
Puente,S., Ramirez-Olivencia,G., Soriano,V. and Holguin,A.
TITLE Clinical differences and viral diversity between newly HIV type
1-diagnosed African and non-African patients in Spain (2005-2007).
JOURNAL AIDS Res. Hum. Retroviruses. 25(1); 37-44 (2009)
PUBMED 19182919
REFERENCE 4
Show all sequences for reference 4
AUTHORS Gonzalez-Alba,J.M., Holguin,A., Garcia,R., Garcia-Bujalance,S.,
Alonso,R., Suarez,A., Delgado,R., Cardenoso,L., Gonzalez,R.,
Garcia-Bermejo,I., Portero,F., de Mendoza,C., Gonzalez-Candelas,F.
and Galan,J.C.
TITLE Molecular Surveillance of HIV-1 in Madrid, Spain: a Phylogeographic
Analysis
JOURNAL J. Virol. 85 (20), 10755-10763 (2011)
PUBMED 21795343
REFERENCE 5
Show all sequences for reference 5
AUTHORS Yebra,G., Delgado,R., Pulido,F., Rubio,R., Galan,J.C., Moreno,S.
and Holguin,A.
TITLE Different trends of transmitted HIV-1 drug resistance in Madrid,
Spain, among risk groups in the last decade.
JOURNAL Arch. Virol.. 159(5); 1079-87 (2014)
PUBMED 24297490
FEATURES Location/Qualifiers
source 1..1302
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="07SP72-400288"
/isolation_source="plasma sample"
/db_xref="taxon:11676"
gene <1..>1302
/gene="pol"
CDS <1..>1302
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABZ81067.1"
/db_xref="GI:167473187"
/translation="PQITLWQRPIVQARIGGQLIEALLDTGADDTVLEEIDLPGKWKP
KMIGGIGGFIKVRQYDQILIEICGKXAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIR
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICLEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPE
IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPITLPEKESWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDIV
TLTEEAELELAENREILREPVHGVYYDPAKDLIAEIQKQGQD"
BASE COUNT 526 a 205 c 271 g 287 t 13 other
ORIGIN
1 cctcaaatca ctctttggca acgaccaata gtccaagcaa gaataggggg acagctaata
61 gaagctctat tagacacagg agcagatgat acagtattag aagaaataga tttaccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggcttta tcaaagtaag acaatatgat
181 cagatactya tagaaatttg tgggaaaarr gcyataggta cagtattagt aggacctaca
241 cctgtcaaca taattgggcg aaacatgttg actcagattg gytgtacttt aaattttcca
301 attagaccta ttgaaactgt gccagtaaaa ttaaagccag gaatggatgg cccaaaggtt
361 aaacaatggc cattaacaga agaaaaaata aaagcattaa cagaaatttg tttagagatg
421 gaaaaggaag gaaaaatttc aaaaattgga cctgaaaayc catacaatac tccagtattt
481 gccataaaga aaaaagatag tactaaatgg agaaaattag tagatttcag agaactcaat
541 aagagaactc aagacttctg ggagatccaa ttaggaatac ctcatcccgc gggattaaaa
601 aagaaraaat cagtaacagt gctagatgtg ggggatgcat acttytcagt tcccttagat
661 aaagaattta gaaagtatac tgcattcact atacctagta taaataatga gacaccagga
721 attagatatc aatacaatgt gctkccacag ggatggaaag gatcaccagc aatatttcag
781 gcaagcatga caaaaatctt agagcccttt agaacaaaaa atccagagat agtaatatay
841 caatatatgg atgatttrta tgtaggatct gacttagaga tagggcagca tagagcaaaa
901 atagaggagt tgagagaaca tctactgaaa tggggattta ccacaccaga caaaaaacat
961 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacggtc
1021 cagcctataa cgttgccaga aaaagaaagc tggactgtca atgayataca gaaattagta
1081 ggaaaactaa attgggcaag tcagatttat gcaggaatta aagtaaagca actgtgtaaa
1141 ctcctcaggg gagccaargc actaacagac atagtaacac tgactgagga agcagaatta
1201 gaattggcag agaacaggga aattctaaga gaacctgtac atggagtata ttatgaccca
1261 gcaaaagact taatagcaga aatacagaaa caagggcaag ac
//
last modified: Tue May 31 10:56 2022