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LOCUS	    EU362926		    1302 bp    RNA     linear	VRL 13-FEB-2008
DEFINITION  HIV-1 isolate 07SP72-400288 pol protein (pol) gene, partial cds
ACCESSION   EU362926
VERSION     EU362926.1 GI:167473186
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1302)
            Show all sequences for reference 1
  AUTHORS   Holguin Fernandez,A., Yebra,G. and Mulder,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2007) Infectious Diseases, Hospital Carlos III,
	    Sinesio Delgado 10, Madrid 28029, Spain
REFERENCE   2
            Show all sequences for reference 2
  AUTHORS   Holguin,A., De Mulder,M., Yebra,G., Lopez,M. and Soriano,V.
  TITLE     Increase of non-B subtypes and recombinants among newly diagnosed
	    HIV-1 native Spaniards and immigrants in Spain.
  JOURNAL   Curr. HIV. Res.. 6(4); 327-34 (2008)
  PUBMED    18691031
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Yebra,G., Rivas,P., Herrero,M.D., Lopez,M., De Mulder,M.,
	    Puente,S., Ramirez-Olivencia,G., Soriano,V. and Holguin,A.
  TITLE     Clinical differences and viral diversity between newly HIV type
	    1-diagnosed African and non-African patients in Spain (2005-2007).
  JOURNAL   AIDS Res. Hum. Retroviruses. 25(1); 37-44 (2009)
  PUBMED    19182919
REFERENCE   4
            Show all sequences for reference 4
  AUTHORS   Gonzalez-Alba,J.M., Holguin,A., Garcia,R., Garcia-Bujalance,S.,
	    Alonso,R., Suarez,A., Delgado,R., Cardenoso,L., Gonzalez,R.,
	    Garcia-Bermejo,I., Portero,F., de Mendoza,C., Gonzalez-Candelas,F.
	    and Galan,J.C.
  TITLE     Molecular Surveillance of HIV-1 in Madrid, Spain: a Phylogeographic
	    Analysis
  JOURNAL   J. Virol. 85 (20), 10755-10763 (2011)
  PUBMED    21795343
REFERENCE   5
            Show all sequences for reference 5
  AUTHORS   Yebra,G., Delgado,R., Pulido,F., Rubio,R., Galan,J.C., Moreno,S.
	    and Holguin,A.
  TITLE     Different trends of transmitted HIV-1 drug resistance in Madrid,
	    Spain, among risk groups in the last decade.
  JOURNAL   Arch. Virol.. 159(5); 1079-87 (2014)
  PUBMED    24297490
FEATURES             Location/Qualifiers
     source	     1..1302
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="07SP72-400288"
		     /isolation_source="plasma sample"
		     /db_xref="taxon:11676"
     gene	     <1..>1302
		     /gene="pol"
     CDS	     <1..>1302
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABZ81067.1"
		     /db_xref="GI:167473187"
		     /translation="PQITLWQRPIVQARIGGQLIEALLDTGADDTVLEEIDLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKXAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIR
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICLEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPE
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPITLPEKESWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDIV
		     TLTEEAELELAENREILREPVHGVYYDPAKDLIAEIQKQGQD"
BASE COUNT	526 a	 205 c	  271 g    287 t     13 other
ORIGIN
       1 cctcaaatca ctctttggca acgaccaata gtccaagcaa gaataggggg acagctaata 
      61 gaagctctat tagacacagg agcagatgat acagtattag aagaaataga tttaccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggcttta tcaaagtaag acaatatgat 
     181 cagatactya tagaaatttg tgggaaaarr gcyataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattgggcg aaacatgttg actcagattg gytgtacttt aaattttcca 
     301 attagaccta ttgaaactgt gccagtaaaa ttaaagccag gaatggatgg cccaaaggtt 
     361 aaacaatggc cattaacaga agaaaaaata aaagcattaa cagaaatttg tttagagatg 
     421 gaaaaggaag gaaaaatttc aaaaattgga cctgaaaayc catacaatac tccagtattt 
     481 gccataaaga aaaaagatag tactaaatgg agaaaattag tagatttcag agaactcaat 
     541 aagagaactc aagacttctg ggagatccaa ttaggaatac ctcatcccgc gggattaaaa 
     601 aagaaraaat cagtaacagt gctagatgtg ggggatgcat acttytcagt tcccttagat 
     661 aaagaattta gaaagtatac tgcattcact atacctagta taaataatga gacaccagga 
     721 attagatatc aatacaatgt gctkccacag ggatggaaag gatcaccagc aatatttcag 
     781 gcaagcatga caaaaatctt agagcccttt agaacaaaaa atccagagat agtaatatay 
     841 caatatatgg atgatttrta tgtaggatct gacttagaga tagggcagca tagagcaaaa 
     901 atagaggagt tgagagaaca tctactgaaa tggggattta ccacaccaga caaaaaacat 
     961 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacggtc 
    1021 cagcctataa cgttgccaga aaaagaaagc tggactgtca atgayataca gaaattagta 
    1081 ggaaaactaa attgggcaag tcagatttat gcaggaatta aagtaaagca actgtgtaaa 
    1141 ctcctcaggg gagccaargc actaacagac atagtaacac tgactgagga agcagaatta 
    1201 gaattggcag agaacaggga aattctaaga gaacctgtac atggagtata ttatgaccca 
    1261 gcaaaagact taatagcaga aatacagaaa caagggcaag ac
//
last modified: Tue May 31 10:56 2022


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