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LOCUS EU346204 1092 bp RNA linear VRL 31-DEC-2008
DEFINITION HIV-1 isolate 361760_0_p2_1 from USA pol protein (pol) gene,
partial cds
ACCESSION EU346204
VERSION EU346204.1 GI:169635177
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1092)
Show all sequences for reference 1
AUTHORS Agwu,A., Lindsey,J.C., Ferguson,K., Zhang,H., Spector,S.,
Rudy,B.J., Ray,S.C., Douglas,S.D., Flynn,P.M. and Persaud,D.
TITLE Analyses of HIV-1 drug-resistance profiles among infected
adolescents experiencing delayed antiretroviral treatment switch
after initial nonsuppressive highly active antiretroviral therapy.
JOURNAL AIDS Patient. Care. STDS.. 22(7); 545-52 (2008)
PUBMED 18479228
REFERENCE 2 (bases 1 to 1092)
Show all sequences for reference 2
AUTHORS Agwu,A., Lindsey,J., Ferguson,K., Zhang,H., Spector,S., Rudy,B.,
Ray,S.C., Douglas,S., Flynn,P. and Persaud,D.
TITLE Direct Submission
JOURNAL Submitted (14-DEC-2007) Pediatrics, Infectious Diseases, Johns
Hopkins University School of Medicine, 600 N. Wolfe Street, Park
256, Baltimore, MD 21287, USA
FEATURES Location/Qualifiers
source 1..1092
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="361760_0_p2_1"
/isolation_source="subject 361760 plasma drawn at 0 weeks"
/db_xref="taxon:11676"
/clone="p2_1"
/country="USA"
/note="PACTG trial 381"
gene <1..>1092
/gene="pol"
CDS <1..>1092
/gene="pol"
/note="contains PR and RT regions"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACA58364.1"
/db_xref="GI:169635178"
/translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEELNLPGRWKP
KMIGGIGGFIKVKQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIVLPEKDSWTVNDIQKLVGKLN"
BASE COUNT 427 a 179 c 224 g 261 t 1 other
ORIGIN
1 cctcaratca ctctttggca acgacccctc gtcacaataa aggtcggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aggaactaaa tttgccagga
121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaaa acagtatgat
181 cagataccca tagaaatatg tggacataaa gctattggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaacttgttg actcagcttg gttgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagaaatttg tacagaaatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gctataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat
541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttgaaa
601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagacttca ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg
721 gttagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa acccagacat agttatctat
841 caatacatgg atgatttgta tgtagggtct gacttagaaa tagggcagca tagaacaaaa
901 atagaagaac tgagacaaca tctgttgaag tggggattta caacaccaga caaaaaacat
961 cagaaggaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 caacctatag tactgccaga aaaagatagc tggactgtca atgatataca gaagttagtg
1081 ggaaaattga at
//
last modified: Tue May 31 10:56 2022