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LOCUS EU308034 630 bp DNA linear VRL 05-MAY-2008
DEFINITION HIV-1 isolate sw017.09121143 from South Africa pol protein (pol)
gene, partial cds
ACCESSION EU308034
VERSION EU308034.1 GI:186968557
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 630)
Show all sequences for reference 1
AUTHORS Marconi,V.C., Sunpath,H., Lu,Z., Gordon,M., Koranteng-Apeagyei,K.,
Hampton,J., Carpenter,S., Giddy,J., Ross,D., Holst,H., Losina,E.,
Walker,B.D. and Kuritzkes,D.R.
CONSRTM South Africa Resistance Cohort Study Team
TITLE Prevalence of HIV-1 drug resistance after failure of a first highly
active antiretroviral therapy regimen in KwaZulu Natal, South
Africa
JOURNAL Clin. Infect. Dis. 46 (10), 1589-1597 (2008)
PUBMED 18419495
REFERENCE 2 (bases 1 to 630)
Show all sequences for reference 2
AUTHORS Marconi,V.C., Sunpath,H., Lu,Z., Gordon,M., Koranteng-Apeagyei,K.,
Hampton,J., Carpenter,S., Giddy,J., Ross,D., Holst,H., Losina,E.
and Kuritzkes,D.R.
CONSRTM South Africa Resistance Cohort Study Team
TITLE Direct Submission
JOURNAL Submitted (29-NOV-2007) Section of Retroviral Therapeutics, Brigham
and Women''s Hospital, 65 Landsdowne St, Cambridge, MA 02139, USA
FEATURES Location/Qualifiers
source 1..630
/organism="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="sw017.09121143"
/isolation_source="patient with failure of antiretroviral
therapy"
/db_xref="taxon:11676"
/country="South Africa: KwaZulu Natal"
gene <1..>630
/gene="pol"
CDS <1..>630
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACC97062.1"
/db_xref="GI:186968558"
/translation="CVEMEKEGKITKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELN
KRTQDFWEVQLGIPHPAGLQKNKSVTVLDVGDAYFSVPLDESFRKYTAFTIPSINNET
PGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRAKNPEIVIYQYVDDLYVGSDLEIGQ
HRAKIEELRAHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLP"
BASE COUNT 243 a 107 c 132 g 148 t
ORIGIN
1 tgtgtagaaa tggagaagga aggaaaaatt acaaaaattg ggcctgaaaa tccatataac
61 actccaatat ttgccataaa aaagaaggac agtactaagt ggagaaaatt agtggatttc
121 agggaactca ataaaagaac tcaagacttt tgggaggttc aattaggaat accacatcca
181 gcagggttac agaagaataa atcagtgacg gtactagatg tgggggatgc ctatttttca
241 gttcctttag atgaaagctt caggaaatat actgcattca ccatacctag tataaataat
301 gaaacaccag ggattagata tcaatataat gtgcttccac agggatggaa aggatcacca
361 gcaatattcc aaagtagcat gacaaaaatc ttagagccct ttagagcaaa aaatccagaa
421 atagtcatct atcaatatgt ggatgactta tatgtaggat ctgacttaga aatagggcaa
481 catagagcaa aaatagagga gttaagagca catctattaa agtggggatt taccacacca
541 gacaagaagc atcagaaaga acccccattt ctttggatgg ggtatgaact ccatcctgac
601 aaatggacag tacagcctat acagctgcca
//
last modified: Tue May 31 10:56 2022