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LOCUS	    EU255525		    1302 bp    RNA     linear	VRL 23-JUN-2008
DEFINITION  HIV-1 isolate 07SP40-371782 from Spain pol protein (pol) gene,
	    partial cds
ACCESSION   EU255525
VERSION     EU255525.2 GI:192288336
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1302)
            Show all sequences for reference 1
  AUTHORS   Holguin,A., De Mulder,M., Yebra,G., Lopez,M. and Soriano,V.
  TITLE     Increase of non-B subtypes and recombinants among newly diagnosed
	    HIV-1 native Spaniards and immigrants in Spain.
  JOURNAL   Curr. HIV. Res.. 6(4); 327-34 (2008)
  PUBMED    18691031
REFERENCE   2 (bases 1 to 1302)
            Show all sequences for reference 2
  AUTHORS   Holguin,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2007) Hospital Carlos III, Sinesio Delgado 10,
	    Madrid 28029, Spain
REFERENCE   3 (bases 1 to 1302)
            Show all sequences for reference 3
  AUTHORS   Holguin,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2008) Hospital Carlos III, Sinesio Delgado 10,
	    Madrid 28029, Spain
REFERENCE   4
            Show all sequences for reference 4
  AUTHORS   Yebra,G., Rivas,P., Herrero,M.D., Lopez,M., De Mulder,M.,
	    Puente,S., Ramirez-Olivencia,G., Soriano,V. and Holguin,A.
  TITLE     Clinical differences and viral diversity between newly HIV type
	    1-diagnosed African and non-African patients in Spain (2005-2007).
  JOURNAL   AIDS Res. Hum. Retroviruses. 25(1); 37-44 (2009)
  PUBMED    19182919
REFERENCE   5
            Show all sequences for reference 5
  AUTHORS   Yebra,G., Delgado,R., Pulido,F., Rubio,R., Galan,J.C., Moreno,S.
	    and Holguin,A.
  TITLE     Different trends of transmitted HIV-1 drug resistance in Madrid,
	    Spain, among risk groups in the last decade.
  JOURNAL   Arch. Virol.. 159(5); 1079-87 (2014)
  PUBMED    24297490
FEATURES             Location/Qualifiers
     source	     1..1302
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="07SP40-371782"
		     /db_xref="taxon:11676"
		     /country="Spain"
		     /note="recombinant CRF11_cpx subject originated from
		     Equatorial Guinea"
     gene	     <1..>1302
		     /gene="pol"
     CDS	     <1..>1302
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABX56395.1"
		     /db_xref="GI:161075277"
		     /translation="PQITLWQRPLVTIKVAGQLREALLDTGADDTVLENLELPGRWKP
		     KMIGGIGGFIKVKQYEEIAIEIEGKKAIGTVLIGPTPVNIIGRNMLTQIGCTLNFPIS
		     PVDTVPVKLKPGMDGPKVKQWPLTEEKIKALXEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDXXFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPE
		     IVIYQYMDDLYVGSDLELGQHREKVEELRNHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIQLPDKECWTVNDIQKLVGKLNWASQIYPGIKVXQLCKLIRGTKALTDVV
		     TLTAEAELELAENREILKEPVHGVYYDPSKDIVAEVQKQGHD"
BASE COUNT	510 a	 209 c	  280 g    290 t     13 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gttacaataa aagtagcggg gcagctgagg 
      61 gaagctctat tagatacagg agcagatgat acagtattag aaaacttaga gttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tyaaagtcaa acagtatgag 
     181 gaaatagcca tagaaattga aggaaaaaag gctataggta cagtrttaat aggacctaca 
     241 cctgtcaaca taattggaag gaatatgttg actcagattg gatgtacttt aaattttcca 
     301 attagtcctg ttgacactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa yagaaatttg yacagaaatg 
     421 garaaggaag gaaaaatttc aaaaattggg cctgaaaatc catataacac tccagtgttt 
     481 gccataaaga aaaaggacag cactaaatgg agaaaattag ttgattttag agaactcaat 
     541 aaaagractc aagacttctg ggaagtccag ttaggaatac cacacccagc agggttaaaa 
     601 aagaaaaagt cagtaacagt tctagatgta ggggatgcat atttttcagt ccctctagat 
     661 cnarrcttca ggaagtatac tgcattcact atacctagta taaacaatga gacaccaggg 
     721 gttagatatc agtacaacgt gctaccacag ggatggaaag gatcaccagc aatattccag 
     781 agtagcatga caaagatytt agaaccattt agaaaacaaa acccagaaat agttatctat 
     841 cagtacatgg atgacttgta tgtaggatct gatttagaat taggrcagca tagagaaaag 
     901 gtagaggaac taagaaatca tctcttgaag tggggattca ccacaccaga taaaaagcat 
     961 cagaaagaac ctccatttct ttggatggga tatgagctcc atcccgacaa atggacggta 
    1021 caacctatac agctgccaga caaagaatgt tggactgtta atgacataca aaaattagtg 
    1081 ggaaarctaa attgggcaag tcagatttat ccagggatca aagtaaraca gttatgtaaa 
    1141 ctcattaggg ggacaaaagc actaacagat gtagtaacat tgacagcaga agcagaatta 
    1201 gaactggcag aaaacaggga aattctaaaa gaaccagtgc atggggtata ttatgaccca 
    1261 tcaaaagata tagtagcaga agtacagaaa caagggcatg ac
//
last modified: Tue May 31 10:56 2022


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