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LOCUS	    EU255513		    1302 bp    RNA     linear	VRL 23-JUN-2008
DEFINITION  HIV-1 isolate 07SP28-350582 from Spain pol protein (pol) gene,
	    partial cds
ACCESSION   EU255513
VERSION     EU255513.1 GI:161075252
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1302)
            Show all sequences for reference 1
  AUTHORS   Holguin,A., De Mulder,M., Yebra,G., Lopez,M. and Soriano,V.
  TITLE     Increase of non-B subtypes and recombinants among newly diagnosed
	    HIV-1 native Spaniards and immigrants in Spain.
  JOURNAL   Curr. HIV. Res.. 6(4); 327-34 (2008)
  PUBMED    18691031
REFERENCE   2 (bases 1 to 1302)
            Show all sequences for reference 2
  AUTHORS   Holguin,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2007) Hospital Carlos III, Sinesio Delgado 10,
	    Madrid 28029, Spain
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Yebra,G., Rivas,P., Herrero,M.D., Lopez,M., De Mulder,M.,
	    Puente,S., Ramirez-Olivencia,G., Soriano,V. and Holguin,A.
  TITLE     Clinical differences and viral diversity between newly HIV type
	    1-diagnosed African and non-African patients in Spain (2005-2007).
  JOURNAL   AIDS Res. Hum. Retroviruses. 25(1); 37-44 (2009)
  PUBMED    19182919
REFERENCE   4
            Show all sequences for reference 4
  AUTHORS   Gonzalez-Alba,J.M., Holguin,A., Garcia,R., Garcia-Bujalance,S.,
	    Alonso,R., Suarez,A., Delgado,R., Cardenoso,L., Gonzalez,R.,
	    Garcia-Bermejo,I., Portero,F., de Mendoza,C., Gonzalez-Candelas,F.
	    and Galan,J.C.
  TITLE     Molecular Surveillance of HIV-1 in Madrid, Spain: a Phylogeographic
	    Analysis
  JOURNAL   J. Virol. 85 (20), 10755-10763 (2011)
  PUBMED    21795343
REFERENCE   5
            Show all sequences for reference 5
  AUTHORS   Yebra,G., Delgado,R., Pulido,F., Rubio,R., Galan,J.C., Moreno,S.
	    and Holguin,A.
  TITLE     Different trends of transmitted HIV-1 drug resistance in Madrid,
	    Spain, among risk groups in the last decade.
  JOURNAL   Arch. Virol.. 159(5); 1079-87 (2014)
  PUBMED    24297490
FEATURES             Location/Qualifiers
     source	     1..1302
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="07SP28-350582"
		     /db_xref="taxon:11676"
		     /country="Spain"
		     /note="subject originated from Equatorial Guinea genotype:
		     C"
     gene	     <1..>1302
		     /gene="pol"
     CDS	     <1..>1302
		     /gene="pol"
		     /note="contains reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABX56383.1"
		     /db_xref="GI:161075253"
		     /translation="PQITLWQRPLVAIKVEGQIREALLDTGADDTVLEEIKLPGNWKP
		     XMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTAICEEMEKEGKITRIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSTNNETPGIRYCYNVLPQGWKGSPAIFQSSMTKILEPFRTQNKD
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCXLLRGTKALTDIV
		     PLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQE"
BASE COUNT	511 a	 209 c	  280 g    290 t     12 other
ORIGIN
       1 cctcaaatca ctctttggca rcgacccctt gtygcaataa aagtagaggg acagataagr 
      61 gaggctctct tagacacagg agcagatgat acagtattag aagaaataaa actgccagga 
     121 aattggaaac caaraatgat aggrggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 caaatactta tagaaatttg tggaaaaaag gctataggta cagtaytagt aggacctaca 
     241 cctgtcaaca taattggaag raatatgttg actcagcttg gatgcacact aaattttcca 
     301 attagtccca ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtc 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagcaatatg cgaggagatg 
     421 gagaaggaag gaaaaattac aagaattggg cctgaaaatc catataacac tccagtattt 
     481 gccataaaaa agaaggacag tactaagtgg agaaaattag tagatttcag ggaactcaat 
     541 aaaagaactc aagacttttg ggaagttcaa ttagggatac cacacccagc agggttaaaa 
     601 aagaaaaaat cagtgacagt actggatgtg ggggatgcat atttttcagt tcctttagat 
     661 aaggaattca ggaartatac tgcattcacc atacctagta caaacaatga aacaccagga 
     721 attagatatt gctataatgt tcttccacar gggtggaaag gatcaccagc aatattccag 
     781 agtagcatga caaaaatctt agagcccttt aggacacaaa acaaagacat agttatctat 
     841 caatatatgg atgacttgta tgtaggatct gacttagaaa tagggcaaca tagagcaaaa 
     901 atagargagt taagagaaca tctattgagg tggggattta ctacaccaga caagaaacat 
     961 cagaaagaac ctccattttt atggatgggg tatgaactcc atcctgacaa atggacagta 
    1021 cagcctatac agctgccaga aaaggatagc tggactgtca atgatataca gaagttagtg 
    1081 gggaaattaa actgggcaag tcagatttac ccagggatta aggtaaagca attgtgtara 
    1141 ctccttagrg gaaccaaagc attaacagac atagtaccac taactgaaga agcagaatta 
    1201 gaattggcag agaacaggga aattctaaaa gaaccagtac atggagtata ttatgaccca 
    1261 tcaaaagact taatagctga aatacagaaa caggggcagg aa
//
last modified: Tue May 31 10:56 2022


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