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LOCUS	    EU236537		    1497 bp    RNA     linear	VRL 03-APR-2008
DEFINITION  HIV-1 isolate 9376 from United Kingdom pol protein (pol) gene,
	    partial cds
ACCESSION   EU236537
VERSION     EU236537.1 GI:159171440
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1497)
            Show all sequences for reference 1
  AUTHORS   Lewis,F., Hughes,G.J., Rambaut,A., Pozniak,A. and Leigh Brown,A.J.
  TITLE     Episodic sexual transmission of HIV revealed by molecular
	    phylodynamics
  JOURNAL   PLoS Med. 5 (3), E50 (2008)
  PUBMED    18351795
REFERENCE   2 (bases 1 to 1497)
            Show all sequences for reference 2
  AUTHORS   Lewis,F., Hughes,G.J., Rambaut,A., Pozniak,A. and Leigh Brown,A.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2007) Institute for Evolutionary Biology,
	    University of Edinburgh, West Mains Road, Edinburgh EH9 3JT,
	    Scotland
FEATURES             Location/Qualifiers
     source	     1..1497
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="9376"
		     /db_xref="taxon:11676"
		     /country="United Kingdom"
     gene	     <1..>1497
		     /gene="pol"
     CDS	     <1..>1497
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABW96116.1"
		     /db_xref="GI:159171441"
		     /translation="PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEDMNLPGKWKP
		     KMIGGIGGFIKVRQYDNILLEICGHKAIGTVLVGPTPVNIIGRNLLTQLGCTLNFPIS
		     PIETVPVKLKPGTDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQHSMTKILEPFRKQNPD
		     IXIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTEVV
		     PLTEEAELELAENREILKEPVHGVYYDPSKDLIAELQKQGQGQWTYQIYQEPFKNLKT
		     GKYARMRGAHTNDVRQLTEAVQKIATESIVIWGKTPKFKLPIQKETWET"
BASE COUNT	602 a	 248 c	  309 g    336 t      2 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccctc gtcacaataa ggataggggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgat acagtgttag aagatatgaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 aacatactcc tagaaatctg tggacataaa gctataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagcttg gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaacggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagagatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagaaaactc aagacttctg ggaagttcaa ttagggatac cacatcccgc agggttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat 
     661 aaagatttca ggaagtatac tgcatttacc atacctagta taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa 
     781 catagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agwtatctat 
     841 caatacatgg atgatttgta tgtaggctct gacttagaaa tagggcagca tagaacaaaa 
     901 atagaagaac tgagacaaca tttgttgaag tgggggttta ccacaccaga caaaaaacat 
     961 cagaaagaac ctccattcct ttggatgggt tatgaacttc atcctgataa atggacagtg 
    1021 cagcctatag tgctgccaga aaaagacagc tggactgtca atgacataca aaaattagtg 
    1081 ggaaaattga attgggcaag tcagatttat gcagggatta aagtaaagca attatgtaaa 
    1141 ctccttaggg gaaccaaagc attaacagaa gtagtaccac taacagaaga agcagagcta 
    1201 gaactrgcag aaaacaggga aattctaaaa gaaccagtac atggagtgta ttatgacccc 
    1261 tcaaaagact taatagcaga actacagaag caggggcaag gccaatggac atatcaaatt 
    1321 tatcaagagc catttaaaaa cctgaaaaca ggaaaatatg caagaatgag gggtgcccac 
    1381 actaatgatg taagacagtt aacagaggca gtgcaaaaaa tagctacaga aagtatagta 
    1441 atatggggaa agactcctaa attcaaacta cccatacaaa aagaaacatg ggaaaca
//
last modified: Tue May 31 10:56 2022


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