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LOCUS	    EU236443		    1497 bp    RNA     linear	VRL 03-APR-2008
DEFINITION  HIV-1 isolate 9272 from United Kingdom pol protein (pol) gene,
	    partial cds
ACCESSION   EU236443
VERSION     EU236443.1 GI:159171134
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1497)
            Show all sequences for reference 1
  AUTHORS   Lewis,F., Hughes,G.J., Rambaut,A., Pozniak,A. and Leigh Brown,A.J.
  TITLE     Episodic sexual transmission of HIV revealed by molecular
	    phylodynamics
  JOURNAL   PLoS Med. 5 (3), E50 (2008)
  PUBMED    18351795
REFERENCE   2 (bases 1 to 1497)
            Show all sequences for reference 2
  AUTHORS   Lewis,F., Hughes,G.J., Rambaut,A., Pozniak,A. and Leigh Brown,A.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2007) Institute for Evolutionary Biology,
	    University of Edinburgh, West Mains Road, Edinburgh EH9 3JT,
	    Scotland
FEATURES             Location/Qualifiers
     source	     1..1497
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="9272"
		     /db_xref="taxon:11676"
		     /country="United Kingdom"
     gene	     <1..>1497
		     /gene="pol"
     CDS	     <1..>1497
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABW96022.1"
		     /db_xref="GI:159171135"
		     /translation="PQITLWQRPLVTIRIGGQVKEALLDTGADDTVLEEMSLPGRWKP
		     KMIGGIGGFIKVRQYDQIPIEICGQKAIGTVLIGPTPVNIIGRNLLTKIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALIEICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPD
		     MVIYQYMDDLYVGSDLEIEQHRTKIEKLREHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVV
		     PLTEEAELELAENREILKEPVHGVYYDPSKDLVAEIQKQEQGQWTYQIYQEPFKNLKT
		     GKYARMRGAHTNDVKQLTEAVQKIATESIVIWGKTPKFRLPIQKETWEA"
BASE COUNT	608 a	 245 c	  320 g    324 t
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa ggataggagg gcaagtaaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgag tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagataccaa tagaaatttg tggacaaaaa gctataggta cagtgttaat aggacctaca 
     241 ccggtcaaca taataggaag aaatctgttg actaagattg gttgcacctt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa tagaaatttg tacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaacc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaactag tagatttcag ggaacttaat 
     541 aagaaaactc aagacttctg ggaagttcag ttaggaatac cacatcccgc aggattaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagac 
     661 aaagacttca ggaagtatac tgcattcacc atacctagta taaacaatga gacaccaggg 
     721 attagatatc agtacaatgt gctaccacag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga taaaaatttt agagcctttt agaaaacaaa atccagacat ggttatctat 
     841 caatacatgg atgatttgta tgtaggatct gatttagaaa tagaacagca tagaacaaaa 
     901 atagagaaac tgagagaaca tctgttaagg tggggattta ccacaccaga caaaaaacat 
     961 cagaaagaac ctccattcct ttggatgggg tatgaactcc atcctgataa atggacagta 
    1021 cagcctatac agctaccaga aaaagacagc tggactgtca atgatataca gaagttagtg 
    1081 ggaaaattga attgggcaag tcagatatac ccagggatta aggtgaggca attgtgtaaa 
    1141 ctccttaggg gaaccaaagc actaacagaa gtagtaccac taacagaaga agcagaacta 
    1201 gaactggcag aaaacaggga gattctaaaa gagccagtgc atggggtgta ttatgaccca 
    1261 tcaaaagact tagtagcaga aatacagaag caggagcaag gccagtggac atatcaaatt 
    1321 tatcaagagc catttaaaaa tctgaaaaca ggaaaatatg caagaatgag gggtgcccac 
    1381 actaatgatg taaaacaatt aacagaggca gtgcaaaaaa tagccacaga aagcatagta 
    1441 atatggggaa agactcctaa atttagacta cccatacaga aagaaacatg ggaagca
//
last modified: Tue May 31 10:56 2022


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