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LOCUS	    EU184149		    1043 bp    RNA     linear	VRL 08-MAY-2008
DEFINITION  HIV-1 isolate 872v3_108 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   EU184149
VERSION     EU184149.1 GI:164416823
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1043)
            Show all sequences for reference 1
  AUTHORS   Gottlieb,G.S., Heath,L., Nickle,D.C., Wong,K.G., Leach,S.E.,
	    Jacobs,B., Gezahegne,S., van 't Wout,A.B., Jacobson,L.P.,
	    Margolick,J.B. and Mullins,J.I.
  TITLE     HIV-1 variation before seroconversion in men who have sex with men:
	    analysis of acute/early HIV infection in the multicenter AIDS
	    cohort study
  JOURNAL   J. Infect. Dis. 197 (7), 1011-1015 (2008)
  PUBMED    18419538
REFERENCE   2 (bases 1 to 1043)
            Show all sequences for reference 2
  AUTHORS   Gottlieb,G.S., Heath,L., Nickle,D.C., Wong,K.G., Leach,S.L.,
	    Jacobs,B., Gezahegne,S., van't Wout,A.B., Jacobson,L.P.,
	    Margolick,J.B. and Mullins,J.I.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2007) Medicine/Infectious Diseases, University of
	    Washington, 960 Republican Street, Rosen Building, Seattle, WA
	    98195, USA
FEATURES             Location/Qualifiers
     source	     1..1043
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="872v3_108"
		     /isolation_source="plasma from individual
		     preseroconversion"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /note="subtype: B"
     gene	     <1..>1043
		     /gene="env"
     CDS	     <1..>1043
		     /gene="env"
		     /note="V1-V5 region"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABY53669.1"
		     /db_xref="GI:164416824"
		     /translation="KLTPLCVTLNCTNDLRNTTNATNNSWEKMETGEIKNCSFNITTS
		     IRDKMQKEYALFYKLDIVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHFCAPAG
		     FAILKCKDKKFSGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTDN
		     AKTIIVQLKEPVEINCTRPNNNTRRSIHIGPGKAFYTTGEIIGDIRQAHCNISRAKWN
		     NTLQQIVKKLKEQFGNKTIVFNHSSGGDPEIIMHSFNCAGEFFYCNSTQLFNSTWNNT
		     ERVNNTEGNGTIILPCRIKQIVNMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGN
		     SNSSNEIEVFRPG"
BASE COUNT	413 a	 173 c	  196 g    261 t
ORIGIN
       1 taaaattaac cccactctgt gttactttaa attgcactaa tgatttgagg aatactacta 
      61 atgccactaa taatagttgg gaaaagatgg agacaggaga aataaaaaac tgctctttca 
     121 atatcaccac aagcataaga gataagatgc aaaaagagta tgcacttttt tataaacttg 
     181 atatagtacc aatagataat gataatacta gctataggtt gataagttgt aacacctcag 
     241 tcattacaca ggcctgtcca aaagtatcct ttgagccaat tcccatacat ttttgtgccc 
     301 cggctggttt tgcgattcta aaatgtaaag ataagaagtt cagtggaaaa ggaccatgta 
     361 caaatgtcag cacagtacaa tgtacacatg gaattaggcc agtagtatca actcaactgc 
     421 tgttaaatgg cagtctagca gaagaagagg tagtaattag atctgaaaat ttcacggaca 
     481 atgctaaaac cataatagta cagctaaagg aacctgtaga aattaattgt acaagaccca 
     541 acaacaatac cagaagaagc atacatatag gaccagggaa agcattttat acaacaggag 
     601 aaataatagg agatataaga caagcacatt gtaacattag tagagcaaaa tggaataaca 
     661 ctttacaaca gatagttaaa aaattaaaag aacaatttgg aaataaaacc atagtcttta 
     721 atcactcctc aggaggggac ccagaaatta taatgcacag ttttaattgt gcaggggaat 
     781 ttttctactg taattcaaca caactgttta atagtacttg gaataatact gaaagggtaa 
     841 ataacactga aggaaatggc acaatcatac tcccatgcag aataaaacaa attgtaaaca 
     901 tgtggcagga agtaggaaaa gcaatgtatg cccctcccat cagaggacaa attagatgtt 
     961 catcaaatat tacagggctg ctattaacaa gagatggtgg taatagtaat agcagcaacg 
    1021 agatcgaggt cttcagacct gga
//
last modified: Tue May 31 10:56 2022


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