View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS EU184091 1037 bp RNA linear VRL 08-MAY-2008
DEFINITION HIV-1 isolate 864v9_2529 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION EU184091
VERSION EU184091.1 GI:164416712
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1037)
Show all sequences for reference 1
AUTHORS Gottlieb,G.S., Heath,L., Nickle,D.C., Wong,K.G., Leach,S.E.,
Jacobs,B., Gezahegne,S., van 't Wout,A.B., Jacobson,L.P.,
Margolick,J.B. and Mullins,J.I.
TITLE HIV-1 variation before seroconversion in men who have sex with men:
analysis of acute/early HIV infection in the multicenter AIDS
cohort study
JOURNAL J. Infect. Dis. 197 (7), 1011-1015 (2008)
PUBMED 18419538
REFERENCE 2 (bases 1 to 1037)
Show all sequences for reference 2
AUTHORS Gottlieb,G.S., Heath,L., Nickle,D.C., Wong,K.G., Leach,S.L.,
Jacobs,B., Gezahegne,S., van't Wout,A.B., Jacobson,L.P.,
Margolick,J.B. and Mullins,J.I.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2007) Medicine/Infectious Diseases, University of
Washington, 960 Republican Street, Rosen Building, Seattle, WA
98195, USA
FEATURES Location/Qualifiers
source 1..1037
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="864v9_2529"
/isolation_source="plasma from individual
preseroconversion"
/db_xref="taxon:11676"
/country="USA"
/note="subtype: B"
gene <1..>1037
/gene="env"
CDS <1..>1037
/gene="env"
/note="V1-V5 region"
/codon_start="3"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABY53616.1"
/db_xref="GI:164416713"
/translation="KLTPLCVTLNCTDNLRNGTNVTSSERGEIKNCSFNITTRVRDKV
QKEYALFYKLDVVQIADSNNNNTKYRLINCNTSVITRACPKVSFEPIPIHYCTPAGFA
IIKCNDKKFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEKEVVIRSENFTDNAK
TIIVQLNKSVQINCTRPNNNTRKSVPIGPGRALYTTEIIGNIRQAHCNLSGAEWNDTL
KQIVEKLREQFGNNTIVFKQSSGGDPEIVTHSFNCGGEFFYCNTTPLFNGAWYSNGTS
NNTEGNNTITLQCRIKQIVNMWQEVGKAMYAPPIRGQIKCSSSITGLLLTRDGGKNKN
NTNETEIFRPG"
BASE COUNT 409 a 176 c 199 g 253 t
ORIGIN
1 taaaattaac cccactctgt gttactttaa attgcactga taatttgagg aatggtacta
61 atgtcactag tagtgagaga ggagaaataa aaaactgctc tttcaacatc accacaaggg
121 taagagataa ggtgcagaaa gaatatgctc tcttctataa gcttgatgta gtacaaatag
181 cggatagtaa taataataat actaaatata gattgataaa ttgtaatacc tcagtcatta
241 cacgggcctg tccaaaggta tcctttgagc caattcccat acattattgt accccggctg
301 gttttgcgat tataaaatgt aacgataaaa agttcaatgg aacaggaccc tgtaaaaatg
361 tcagcacagt acaatgtaca catggaatta gaccagtagt gtcaactcaa ctgctgttaa
421 atggcagcct agcagaaaaa gaggtagtaa ttagatctga aaacttcacg gacaatgcta
481 aaaccataat agtacagctg aacaaatctg tacaaattaa ttgtacaaga cccaacaaca
541 atacaagaaa aagtgtacct ataggaccag ggagagcatt gtatacaaca gaaataatag
601 gaaatataag acaagcacat tgtaacctta gtggagcaga atggaatgac actttaaaac
661 agatagttga aaaattaaga gaacaatttg ggaataacac aatagtcttt aagcaatcct
721 caggaggaga cccagaaatt gtaactcaca gttttaattg tggaggggaa tttttctact
781 gtaatacaac accactgttt aatggtgcct ggtatagtaa tggaacatca aataacactg
841 aagggaataa cacaatcaca ctccaatgca gaataaaaca aattgtaaac atgtggcagg
901 aagtaggaaa agcaatgtac gcccctccca tcaggggaca aattaaatgt tcatcaagta
961 ttacagggct gctattaaca agagatggtg gcaaaaataa aaataatacg aacgagactg
1021 agatcttcag acctgga
//
last modified: Tue May 31 10:56 2022