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LOCUS	    EU177957		    1006 bp    RNA     linear	VRL 30-SEP-2008
DEFINITION  HIV-1 isolate GH_103 from Ghana pol protein (pol) gene, partial cds
ACCESSION   EU177957
VERSION     EU177957.1 GI:163963795
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1006)
            Show all sequences for reference 1
  AUTHORS   Delgado,E., Ampofo,W.K., Sierra,M., Torpey,K., Perez-Alvarez,L.,
	    Bonney,E.Y., Mukadi,Y.D., Lartey,M., Nyarko,C., Amenyah,R.N.,
	    Thomson,M. and Najera,R.
  TITLE     High prevalence of unique recombinant forms of HIV-1 in Ghana:
	    molecular epidemiology from an antiretroviral resistance study.
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 48(5); 599-606 (2008)
  PUBMED    18645511
REFERENCE   2 (bases 1 to 1006)
            Show all sequences for reference 2
  AUTHORS   Delgado,E., Ampofo,W., Sierra,M., Perez-Alvarez,L., Bonney,E.,
	    Thomson,M.M. and Najera,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2007) Patogenia Viral, Instituto de Salud Carlos
	    III, Ctra. Majadahonda a Pozuelo Km 2, Majadahonda, Madrid 28220,
	    Spain
FEATURES             Location/Qualifiers
     source	     1..1006
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="GH_103"
		     /isolation_source="plasma"
		     /db_xref="taxon:11676"
		     /country="Ghana"
		     /note="subtype: CRF02_AG; acronym: HIV-1"
     gene	     <1..>1006
		     /gene="pol"
     CDS	     <1..>1006
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABY50822.1"
		     /db_xref="GI:163963796"
		     /translation="PQITLWQRPLVTVRIXGQXIEALLDTGADDTVLEEINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTDICTEMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRTKNPE
		     IVIYQYMDDLYVGSDLEIGQHRAKXEELREHLLRWGLTTPDKKXQKEPPFLWMGYELH
		     P"
BASE COUNT	393 a	 157 c	  208 g    242 t      6 other
ORIGIN
       1 cctcaaatca ctctttggca rcgaccctta gtcacagtaa gaatagrggg acagcyaata 
      61 gaagccctat tagacacagg agcagatgat acagtattag aagaaataaa tttaccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta ttaaagtaag acaatatgat 
     181 cagatactta tagaaatttg tgggaaaaag gccataggta cagtattggt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaattttcca 
     301 attagtccta ttgaaactgt gccagtaaaa ttaaagccag gaatggatgg cccaaaggtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattaa cagacatttg tacagagatg 
     421 gaaaaggaag gaaagatttc aaaaattgga cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaagayag tactaaatgg agaaaattag tagatttcag agaactcaat 
     541 aagagaactc aagacttctg ggaagtccaa ttaggaattc ctcatcccgc gggattaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccttagat 
     661 gaagacttta gaaaatatac tgcattcact atacctagta taaataatga aacaccaggg 
     721 attagatatc agtacaatgt gcttccacag ggatggaaag ggtcaccagc aatatttcag 
     781 gcaagcatga caaaaatctt agagcccttt agaacaaaaa atccagagat agtgatctac 
     841 caatatatgg atgatttata tgtaggatct gacttagaga tagggcagca cagagcaaaa 
     901 rtagaggagt tgagagagca tctattgaga tggggattaa ctacaccaga caaaaaacwt 
     961 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctg
//
last modified: Tue May 31 10:56 2022


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