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LOCUS	    EU177930		    1263 bp    RNA     linear	VRL 30-SEP-2008
DEFINITION  HIV-1 isolate GH_062 from Ghana pol protein (pol) gene, partial cds
ACCESSION   EU177930
VERSION     EU177930.1 GI:163963741
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1263)
            Show all sequences for reference 1
  AUTHORS   Delgado,E., Ampofo,W.K., Sierra,M., Torpey,K., Perez-Alvarez,L.,
	    Bonney,E.Y., Mukadi,Y.D., Lartey,M., Nyarko,C., Amenyah,R.N.,
	    Thomson,M. and Najera,R.
  TITLE     High prevalence of unique recombinant forms of HIV-1 in Ghana:
	    molecular epidemiology from an antiretroviral resistance study.
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 48(5); 599-606 (2008)
  PUBMED    18645511
REFERENCE   2 (bases 1 to 1263)
            Show all sequences for reference 2
  AUTHORS   Delgado,E., Ampofo,W., Sierra,M., Perez-Alvarez,L., Bonney,E.,
	    Thomson,M.M. and Najera,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2007) Patogenia Viral, Instituto de Salud Carlos
	    III, Ctra. Majadahonda a Pozuelo Km 2, Majadahonda, Madrid 28220,
	    Spain
FEATURES             Location/Qualifiers
     source	     1..1263
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="GH_062"
		     /isolation_source="plasma"
		     /db_xref="taxon:11676"
		     /country="Ghana"
		     /note="subtype: CRF02_AG; acronym: HIV-1"
     gene	     <1..>1263
		     /gene="pol"
     CDS	     <1..>1263
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABY50795.1"
		     /db_xref="GI:163963742"
		     /translation="PQITLWQRPVVTVKIGGQPIEALLDTGADDTVLEEINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEIQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPSVFQASMTKILEPFRTKNPE
		     MVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTDXV
		     TLTEEAELELAENREILKEPVHGVYYDPQ"
BASE COUNT	500 a	 198 c	  266 g    287 t     12 other
ORIGIN
       1 cctcaaatca ctctttggca acgaccagta gtcacagtaa aaataggggg acagccaata 
      61 gaagccctat tagacacagg agcagatgat acagtattag aagaaataaa yttaccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 
     181 cagatactta tagaaatttg tggaaaaaag gccataggta cagtattrgt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg acycagattg gttgtacttt aaattttcca 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaggtt 
     361 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tacagagatg 
     421 gaaaaggaag ggaaaatttc aaaaataggg cctgaaaatc catacaatac tccaatattt 
     481 gccataaaga aaaaagatag tactaaatgg agaaaattag tagatttcag agaactcaat 
     541 aagagaactc aagacttctg ggagatccaa ttaggaatac ctcatcccgc rggattaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat ayttttcagt yccmttagat 
     661 gaagacttta gaaagtatac tgcattcact atacctagtg taaataatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccatc agtatttcag 
     781 gcaagyatga caaaaatctt agagcccttt agaacaaaaa atccrgagat ggtgatctac 
     841 caatatatgg atgatttata tgtaggatct gacttagaga tagggcagca tagagcaaaa 
     901 atagaggagt tgagagaaca tctmytgaaa tggggattta ccacaccaga caaaaaacat 
     961 cagaaagaac ctccatttct ttggatggga tatgaactcc atcctgacaa atggacagtc 
    1021 cagcctatag agctgccaga aaaagacagc tggactgtca atgatataca gaaattagtg 
    1081 ggaaaattaa attgggcaag tcagatttat gcaggaatta aagtaaagca actgtgtaaa 
    1141 ctcctcagag gagccaaagc actaacagat rtagtgacac tgactgagga agcagaatta 
    1201 gaattggcag agaacaggga aattctaaaa gaacctgtac atggagtata ttatgaccca 
    1261 caa
//
last modified: Tue May 31 10:56 2022


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