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LOCUS	    EU125949		     762 bp    DNA     linear	VRL 24-SEP-2007
DEFINITION  HIV-1 isolate INU145 from Uganda pol protein (pol) gene, partial
	    cds
ACCESSION   EU125949
VERSION     EU125949.1 GI:157366498
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 762)
            Show all sequences for reference 1
  AUTHORS   Troyer,R.M., Lalonde,M.S., Fraundorf,E., Demers,K.R., Kyeyune,F.,
	    Mugyenyi,P., Syed,A., Whalen,C.C., Bajunirwe,F. and Arts,E.J.
  TITLE     A radiolabeled oligonucleotide ligation assay demonstrates the high
	    frequency of nevirapine resistance mutations in HIV type 1
	    quasispecies of NVP-treated and untreated mother-infant pairs from
	    Uganda.
  JOURNAL   AIDS Res. Hum. Retroviruses. 24(2); 235-50 (2008)
  PUBMED    18284323
REFERENCE   2 (bases 1 to 762)
            Show all sequences for reference 2
  AUTHORS   Troyer,R.M., Lalonde,M.S. and Arts,E.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-AUG-2007) Department of Medicine, Division of
	    Infectious Diseases, Case Western Reserve University, 2109 Adelbert
	    Road, Cleveland, OH 44106, USA
FEATURES             Location/Qualifiers
     source	     1..762
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="INU145"
		     /db_xref="taxon:11676"
		     /country="Uganda"
     gene	     <1..>762
		     /gene="pol"
     CDS	     <1..>762
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABV45337.1"
		     /db_xref="GI:157366499"
		     /translation="TPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLK
		     KKKSVTVLDVGDAYFSVPLDKNFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAI
		     FQSSMTKILEPFRSKNPEITIYQYMDDLYVGSDLEIGQHRTKVEELRAHLLNWGLTTP
		     DKKHQKEPPFLWMGYELHPDKWTVQPIQLPSKNSWTVNDIQKLVGKLNWASQIYPGIK
		     VKQLCKLLRGAKSLTEVVTLTEEAELELAENREILK"
BASE COUNT	299 a	 130 c	  157 g    176 t
ORIGIN
       1 actccagtat ttgctataaa gaaaaaagat agcactaaat ggagaaaatt agtagatttt 
      61 agagagctca ataaaagaac tcaggacttc tgggaagttc aattaggaat acctcatcct 
     121 gcaggtttaa aaaagaaaaa atcagtaaca gtactagatg tgggggacgc atatttttca 
     181 gttcctttag ataaaaactt tagaaagtat actgcgttca ccatacctag tataaacaat 
     241 gagacaccag gaatcaggta tcagtacaat gtgcttccac agggatggaa aggatcacca 
     301 gcaatattcc aaagcagcat gacaaaaatc ttagagccct ttagatcaaa aaatccagaa 
     361 ataactatct atcaatacat ggatgacttg tatgtaggat ctgatttaga aatagggcag 
     421 catagaacaa aagtagaaga gttgagagct catctattga attggggatt gactacccca 
     481 gacaaaaagc atcagaaaga acctccattc ctatggatgg gatatgaact ccatcctgac 
     541 aaatggacag tacagcctat acagctgcca agcaaaaaca gctggactgt caatgatata 
     601 cagaaattag tgggaaaact aaattgggca agtcaaattt atccggggat taaagtaaag 
     661 caactgtgta aactcctcag aggagccaaa tcactaacag aggtagtaac attgactgag 
     721 gaagcagaat tagaattggc agagaacagg gagattctaa aa
//
last modified: Tue May 31 10:56 2022


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