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LOCUS EU125886 762 bp DNA linear VRL 24-SEP-2007
DEFINITION HIV-1 isolate MTU053 from Uganda pol protein (pol) gene, partial
cds
ACCESSION EU125886
VERSION EU125886.1 GI:157366372
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 762)
Show all sequences for reference 1
AUTHORS Troyer,R.M., Lalonde,M.S., Fraundorf,E., Demers,K.R., Kyeyune,F.,
Mugyenyi,P., Syed,A., Whalen,C.C., Bajunirwe,F. and Arts,E.J.
TITLE A radiolabeled oligonucleotide ligation assay demonstrates the high
frequency of nevirapine resistance mutations in HIV type 1
quasispecies of NVP-treated and untreated mother-infant pairs from
Uganda.
JOURNAL AIDS Res. Hum. Retroviruses. 24(2); 235-50 (2008)
PUBMED 18284323
REFERENCE 2 (bases 1 to 762)
Show all sequences for reference 2
AUTHORS Troyer,R.M., Lalonde,M.S. and Arts,E.J.
TITLE Direct Submission
JOURNAL Submitted (30-AUG-2007) Department of Medicine, Division of
Infectious Diseases, Case Western Reserve University, 2109 Adelbert
Road, Cleveland, OH 44106, USA
FEATURES Location/Qualifiers
source 1..762
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="MTU053"
/db_xref="taxon:11676"
/country="Uganda"
gene <1..>762
/gene="pol"
CDS <1..>762
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABV45274.1"
/db_xref="GI:157366373"
/translation="TPIFAIKKKDNTKWRKLVDFRELNKRTQDFWEIQLGIPHPAGLK
KKKSVTVLDVGDAYFSVPLYEDFKKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAI
FQSSMTKILEPFRKQNPEMVIYQYMDDLYVGSDLEIGQHRTKIEELREHLLKWGFTTP
DKKHQKEPPFLWMGYELHPDKWTVQPIILPEKDSWTVNDIQKLVGKLNWASQIYQGIK
VKQLCKCLRGAKALTEVVTLTEEAELELAENREILK"
BASE COUNT 311 a 124 c 152 g 175 t
ORIGIN
1 actccaatat ttgccataaa gaaaaaagac aatactaagt ggagaaaatt agtagatttc
61 agagaactta ataagagaac tcaagacttc tgggaaattc aattaggaat accacatcct
121 gcagggctaa aaaagaaaaa atcagtaaca gtactggatg tgggtgatgc atatttttca
181 gttcccttat atgaagactt taaaaaatat accgcattca ccatacctag cataaacaat
241 gagacaccag gaattagata tcagtacaat gtgcttccac aaggatggaa aggatcaccg
301 gcaatattcc aaagtagtat gacaaaaatc ttagagcctt ttagaaaaca aaatccagaa
361 atggttatct atcaatacat ggatgatttg tatgtaggat ctgacttaga aatagggcag
421 catagaacaa aaatagagga attaagggaa cacctattaa agtggggatt taccacacca
481 gacaaaaagc atcagaaaga acctccattt ctttggatgg gttatgaact ccatcctgat
541 aaatggacag tacagcctat aatactgcca gaaaaggaca gctggactgt caatgatata
601 cagaagttag tgggaaaatt aaattgggca agccagattt atcaaggaat taaagtaaaa
661 caactatgca aatgccttag gggagccaag gcactgacag aagtagtaac actgacagaa
721 gaagcagaat tagaactggc agaaaatagg gaaattctaa aa
//
last modified: Tue May 31 10:56 2022